Trematomus bernacchii (emerald rockcod): 117478078
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Entry
117478078 CDS
T09643
Symbol
tra2a
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
KO
K12897
transformer-2 protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117478078 (tra2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117478078 (tra2a)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117478078 (tra2a)
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117478078 (tra2a)
Spliceosome [BR:
tben03041
]
Common components
Common spliceosomal components
SR proteins
117478078 (tra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
117478078
NCBI-ProteinID:
XP_033980835
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MSDIEDGNYEGRGSRSPSKSDRGSPPRVKSGSRSGSQSPARAAKRSESRSRSRSKSRSRS
RRHSNRRSRSRSYSNRRKSRSRSYSQEYRRKKSPSASPNSSRRRPSGSKSHDFPKEAATQ
GADGDVRANPDPSKCLGVFGLSLYTTERDLREVFSRHGPLAGVNVVYDQRTGRSRGFAFV
YYERIDDSKEAMERANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTHNGGSGSSSGGG
GGGGREGGGRDGGGSREGGRDGGSRDGGGRDGGSRDGGGRDGGRDGGGRDGGGGGSSRRG
RDSHYDRGYERGYDRYEEYDYRYSRRRSPSPYYQRYRSRSRSRSYSPRRY
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatattgaggatggaaactacgagggacgggggtcacgctccccgtctaaatcg
gatcgtgggagtccgcctagggtcaagtcgggcagcaggtccggctcccagagccccgcc
cgggccgccaagcgctccgagtccagatcccgctctcgatcaaaatctaggtctcgttcg
aggcggcactcaaaccgccgctcacgctctcggtcctattccaaccggaggaagtcccgc
tctcgctcctacagccaagagtaccgccgcaagaagagccccagtgcttcccccaattcc
agcaggcgccgtccatctggcagcaagagccatgacttcccaaaagaagcagccactcaa
ggcgcagatggagatgttagggcaaaccctgaccccagcaaatgtttgggggtgtttggc
ctgagcctctacaccacagagcgggacctgcgggaggtgttttcacgccacggccctctg
gcgggggtcaacgtggtgtacgaccagcgcacaggacgctcccgaggcttcgccttcgta
tactacgagcgaatcgatgattccaaagaggcgatggagcgagccaatggcatggagctg
gacgggaggcgcatcagagtggacttttccattactaaacgtgctcacacccccacacca
ggcatctacatgggccggccaactcacaacggtggcagcggcagcagcagtggtggtggg
ggaggaggaggaagggaaggtggtggtagggatggaggaggtagtagggaaggtggtagg
gatggaggtagtagagatggtggtggtagagatggaggtagtagggatggtggtggtagg
gatggaggtagagatggaggcggaagggatggtggtggcggcggcagcagcaggaggggg
agagactcgcattatgaccgtggctacgaacgtggctacgacagatatgaagagtacgat
tataggtacagtcgcagacgctctccatcaccgtactaccaacgatacaggtcccgctca
cggtctcgctcctacagcccacggcgatactaa
DBGET
integrated database retrieval system
