KEGG   Trematomus bernacchii (emerald rockcod): 117478127
Entry
117478127         CDS       T09643                                 
Symbol
polr1f
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA43
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117478127 (polr1f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tben03021]
    117478127 (polr1f)
Transcription machinery [BR:tben03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     117478127 (polr1f)
SSDB
Motif
Pfam: RPA43_OB SHS2_Rpb7-N GAGA_bind XRN_M
Other DBs
NCBI-GeneID: 117478127
NCBI-ProteinID: XP_033980925
LinkDB
Position
Unknown
AA seq 365 aa
MANLEHAEDDPQHVKMSSEISASSAEVQTAAESSALGRDGGALSCAIPSFSAAAELLSAP
YSCLVMNTHRRHIALPPMYLGKKRTGIKEELEGELLKFSQSLKGVPLAYENISILGHHGS
IYDDSGYIHMNIEATFILFQPERGQTLLGNVNKLGVSHVGCLVHGCFNASIPRPNLVTVE
TWRDAGPRIGAELEFEVTALDADMMGVLLIRGRLNRTRVQELLAMAESSESGVPADQPEP
EPEPMEESPEDTPKKKKKKKKKDKVKEEEMTTPSCQDTTAELNRTMNDENVNEAGEKKKK
KKKKHMKEEEVEVGLSRMEVNGSDSSGYLSDKPSTKRKLETDTGVPSSLSEEAPKSKRKR
KSNIA
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggcgaacttggagcatgcagaagacgacccacaacatgtgaaaatgtccagtgaaata
agcgccagtagcgctgaagtccagacggccgcagagtcctcggcactgggcagagacggg
ggcgcgctctcgtgcgcaatcccgtcgttctccgccgccgcggagctgctgtcagcaccg
tactcgtgcctggtgatgaacacgcaccggagacacatcgcactgccgcccatgtacctg
ggcaagaagaggaccggcattaaagaggagctggagggagagctgctcaagttctctcag
agtctgaagggagtacccctggcttatgagaacatcagcatattgggacatcatggaagc
atctacgatgacagtggctacatccacatgaacatagaggccacctttattctctttcag
cccgaaagaggacaaacactgctgggtaacgtcaacaagctaggagtaagccatgtgggc
tgccttgtgcacggctgctttaacgccagcatccccagacctaacctggttaccgtggaa
acgtggcgggacgcagggccgagaatcggagcagagctggagtttgaggtgaccgcactc
gacgctgacatgatgggggtgctgctgatcagaggacgactgaacaggaccagggttcaa
gagctgctggctatggctgagagttcagagtccggcgtccctgcagaccagccagaacct
gaaccagaacccatggaggagtcccctgaagacaccccgaagaagaagaagaagaagaaa
aagaaggacaaagtcaaagaagaggagatgaccacaccctcctgccaagacacaacagca
gagctgaacagaacaatgaacgacgaaaatgtcaatgaagctggtgagaaaaagaagaag
aaaaagaaaaaacatatgaaagaagaggaggtggaggttgggctctctcgcatggaggtc
aacggcagtgactcgagcggttaccttagtgacaagccgagcacgaagaggaaacttgaa
actgacacaggtgtcccatctagcttaagtgaagaagcacccaaatccaagaggaagaga
aaaagtaacattgcctga

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