Trematomus bernacchii (emerald rockcod): 117478156
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Entry
117478156 CDS
T09643
Symbol
rbbp4
Name
(RefSeq) LOW QUALITY PROTEIN: histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03082
ATP-dependent chromatin remodeling
tben03083
Polycomb repressive complex
tben04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117478156 (rbbp4)
03083 Polycomb repressive complex
117478156 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117478156 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117478156 (rbbp4)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
117478156 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
117478156 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
117478156 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117478156 (rbbp4)
PRC2.2
117478156 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
117478156 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
117478156 (rbbp4)
Chromatin remodeling factors
NuRD complex
117478156 (rbbp4)
NuRF complex
117478156 (rbbp4)
NuRF complex (fruit fly)
117478156 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
117478156
NCBI-ProteinID:
XP_033980964
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADKEVGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGK
DYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFEASHYDSEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCIIATKTPTSEVLVXDYTKHPSKPDASGECHPDLRLRGHQKE
GYGLSWNPNLSGSLLSASDDHTICLWDISAVPKEGKIVEAKTIFTGHTAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRSNNTSXPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSTD
PEATV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaagtaggagcatttgatgatgcggttgaggagagggtgataaatgag
gagtacaagatctggaagaaaaacaccccctttctgtatgacctggttatgacccatgct
ttagagtggccaagcctaactgcccagtggctgcctgatgtttccaggccggaggggaag
gactacagtgtgcaccgtctggtgttgggcactcatacatcagatgagcaaaatcaccta
gtcattgccagcgttcagctacccaatgatgacgcccagtttgaagcatcacattatgac
agtgaaaaaggagagtttggaggctttggctcagtgagtggcaagatcgagatagaaatc
aagatcaaccatgaaggagaggttaaccgtgcccgctatatgccccagaacccatgcatc
atcgccaccaagacccccacctctgaagtgctggtgnttgactacaccaaacacccttcc
aaaccagatgcttctggagagtgtcaccctgatcttcgtctcagaggccatcagaaagaa
ggctatggtctttcctggaatccaaatctgtctggctctctccttagtgcttcagatgac
catacaatttgtctgtgggacataagtgctgtgccgaaagaggggaagatcgtagaggca
aagaccatcttcactggtcacactgctgtggtggaggacgtctcatggcacttgctgcac
gagtcactcttcggatctgtagccgatgaccaaaagctcatgatttgggacactcgttca
aacaacacctccnaacccagccatgccgtcgacgcccacacagcagaggtcaactgtttg
tcattcaacccttacagcgagttcattctggcctccggctctgcagacaagactgtggct
ctttgggacttgagaaacttaaaactgaagttgcattcctttgagtcgcacaaagatgag
atcttccaggttcagtggtcacctcataatgagaccatcctggcatccagtggaacagac
cgccgtctcaacgtctgggacctcagtaaaatcggagaggagcagtcaccagaagatgca
gaggatggcccacccgagctactgtttatccatggaggccacacagccaagatctctgac
ttctcctggaaccccaacgagccctgggtcatctgctcggtctctgaagacaacattatg
caagtctggcaaatggctgagaacatctacaatgatgaagatccggagggttcgacagac
cccgaggccacagtgtaa
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integrated database retrieval system
