Trematomus bernacchii (emerald rockcod): 117478184
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Entry
117478184 CDS
T09643
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117478184 (vps52)
Membrane trafficking [BR:
tben04131
]
Protein recycling
Others
EARP complex
117478184 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
117478184 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
COG6_N
Motif
Other DBs
NCBI-GeneID:
117478184
NCBI-ProteinID:
XP_033981013
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MAEVAAAGGAGPDVNTTGNPTEMAMAYLQDENTDGDIPDINLGELDLTTDEFILDEVDIH
IQANLEDDLVKEALKTGVDLRQYSKQVESELQRIEQASIKDYIKESQNIALLHNQITACD
SILERMEGMLSGFQCDLSSISSEIQTLQQQSVSMNVRLKNRQAVRSHLSQLVDELVVPGA
MISTILDSPVTEQGFLEQLHELNNKINFAKELSFRETLACSDIQDIVDRLKLKAVSKIRE
FILQKIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYYSYF
KSYSGRLLKVQYEEVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTVGQRGAILSPAELE
GPILVPHTAQRGDSRYPYETLFRSQHYALLDNGCREFLFLSDFFMVTGNSALDLFNSIMG
KTLSMFLKSMSTYVSDCYDSIAVFLCIHIILRFRAITVKRTIPALDKYWEAVLELLWPRF
ELILEMNIHSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFTNEKTHTLLGQLQ
VEVENFVLKMAAEFPSRRDQLIFLINNYDMMLSVLMERAADDSKEVEGFQQLLLARTQEF
IEEILSPPFGGMIAFVKEAEALMEKGQLDRLKNDEARITQLIRGFSSSWKQSVEAMSQDV
MRSFTNFKNGTSIIQGALTQLIQYYHGFHKVLNQPSFRSLAVRSELINLHHLMVEVKKHK
PNF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtggctgcagctgggggagctggtcccgatgtcaacacaactggaaacccg
acagaaatggccatggcgtacttacaagacgagaatactgatggagacatcccagacatc
aacctgggagaactagacctcaccactgatgagttcatcctggatgaagtggacattcat
atccaggccaatctggaggatgaccttgtgaaggaggcgctcaaaacgggtgttgacctc
cgtcagtactccaaacaggtggagtcagagctgcagaggattgaacaagcctccattaaa
gactacatcaaggagagtcagaacattgctctgctgcacaaccagatcaccgcctgtgac
tccatactggagcgtatggagggcatgctgagcggcttccagtgcgacctgtcctccatc
agcagtgagatccagaccctgcagcagcagtcggtcagcatgaacgtgcggctgaagaac
cggcaggcggtgcgcagccacctcagccagctggtggacgagctggtggtgcccggagcc
atgatctccaccatcctggacagccctgtgacggagcaggggtttctggagcagctgcac
gagctcaacaacaagatcaactttgccaaagagctgagcttcagagagacgctggcctgc
tccgacatccaggacatcgtggaccgcctcaaactcaaggcggtgtcaaagatccgagag
ttcatcctccagaagatttactccttcaggaagccaatgacaaactaccagatcccccag
aacactctgctcaagtacagatttttctatcagttcctcttggccaatgagagaacagtt
gctaaggagatcagagatgagtatgtggacacgatgagtaagatttactacagctacttc
aagtcgtacagcggccggctgctcaaagtgcagtatgaggaggttgcagacaaagatgac
ctgatgggagtagaagacaccgccaagaaaggtttcttctccaagccgtctctgaagagc
aggaacaccatcttcactgtgggccagcggggggccatcctgagtcctgctgagctggag
gggcccatcctggttccacacacagctcagagaggagacagcaggtatccctatgagacg
ctgttccgcagccagcactacgctctgctggacaacggctgcagggagttcctcttcctc
tccgacttcttcatggtgacaggaaactctgccctcgacctcttcaacagcatcatgggg
aaaactctcagcatgttcctgaagagcatgtccacttatgtgtccgactgctacgacagc
atcgccgtcttcctctgcatccacatcatcctccgcttcagagccatcaccgtcaagagg
accatccccgctctcgacaagtactgggaggcggtgttggagctgctgtggccgaggttt
gaactgatcctggagatgaacatccacagcatcagaaacacagaccctcagaaactggga
gtactggataccagaccgcactatatcactcgtcgttatgcagagttctcgtcggccatc
gtcagcatcaaccagacgtttaccaacgagaaaacacacactctgctgggacagctgcag
gtggaggtggagaactttgttctgaagatggcggcagagtttccctccagaagagaccag
ctcatcttcctcatcaacaactacgacatgatgcttagcgtcctcatggagagggcagca
gacgacagtaaggaggtggaaggtttccagcagctgctcctggccaggacccaggagttt
atcgaggagattctgtccccccccttcggagggatgatcgcctttgtgaaggaggccgag
gctctgatggagaaagggcagctggaccgactgaagaacgatgaagctcgtatcactcag
ctgattcgggggttttccagctcgtggaaacagtctgtggaggcgatgagtcaggatgtg
atgaggtccttcaccaacttcaagaatggaaccagcatcatacagggcgctctgacccag
ctgatccagtactaccacggcttccacaaggtcctgaaccagcccagcttcaggagcctg
gccgtccgctcggagctcatcaacctgcaccacctcatggtggaggtgaagaagcacaaa
cccaacttctaa
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integrated database retrieval system
