Trematomus bernacchii (emerald rockcod): 117478236
Help
Entry
117478236 CDS
T09643
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117478236
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
117478236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
117478236
NCBI-ProteinID:
XP_033981101
LinkDB
All DBs
Position
Unknown
AA seq
2066 aa
AA seq
DB search
MLKMDLAGFGVLMLLAVALVQISDSHKDTTGGRKEGAGAAQAVSNKQQSRVRSQGHSPRE
PEDDASPEPSSETSPGTSRSMTLVRLPRGTSPHGDGRHTSKAGPAHAAGVSREDPVSAPR
DGALRTARHPGSPQHRSGVNRRQSSKIGSASTRRLVGPNVCGGQQCCSGWALAPGTNRCI
KPDCQPPCQNRGSCSRPQTCVCRSGFQGPRCEEVAPEQVYIRDGGALRRVQPGTNPFQRD
QPRRRPSERQAIDTTKVQTPRPATTRLPVTQVRRGPPDSSPQQTGTSRTVKRYPSSSGPI
TSNALPNGNGYANGHGSEHRNRHGHRNGPSNGHHNTNRPTSDRQLQGQFNNALSPAGANL
TSNLDRIKIVFTPMVCRRVCSGGRCYNSCEKGDMTTVYSENQQQQQQRQQPKNPGYRLFF
CQIPCLNGGRCIGRDMCWCPSNSTGKFCHLPVPPPARPTPNKEASHHGPKTPSRSMYTLP
LSNQQVSLHPSLVNVHIQHPADSEVHIHQVARVQPGQRPTLSDGAHSVQQRSQPGNGHEH
TSEHNSRHPQTSGNGHGHARQHNNQNGPVGRCFQETVDGQCGKPLPGLTKQDDCCGSVGT
SWGLNMCQKCPAKPAYAVIRNGQVECSKGFKRMNLTHCQDVNECLLPGLCKHAECLNTKG
SFRCICKPGFFLDPDRSHCVSDKAVSDQKAFCYRSVSASSCSLPMVHHITKQICCCSRVG
KAWGPGCDRCPLPGSDHFKEICPAGHGYTYSLSDVQISVTRLGEDDLQSTGVSWEEESPT
FSLPQVPLYPENPETPQAPRDPQTPQHPLHPSHPDRETPKEREDTEILSPPAVVTDSPLK
DPETSPDSSIINQRPDSEDTTHTVSATGIDKCATTPTICGRGKCIPVQTGYTCHCESGFN
LSALQTNCIDVNECDEEPCDGKGRCINSYGSYTCYCHSGYSQVITQNRKFCQDINECSMP
NKCQNGDCVNTEGSYTCECNSGYAKSWKGQCEDVDECRDPSSCPNGVCVNTLGSFECQDC
GPGFRPVNERCVDVNECLNQTACSHGSCVNIEGSYRCNCFQGYKLSPDNICEDVDECALP
GVCLHGRCVNLDGTYKCTCNHGYQVISDGAACEDVNECATGNVCPAGICINTAGSYTCQD
CRPGFGPSADGLRCEDVNECAQGDLCLGGVCANTEGSYTCTRCKAGYRVSQDRQRCEDVD
ECQSVSPCANGICLNSEGSYTCENCPTGYRVSYDGEICQDINECALPTTCPQGTCTNTDG
SFTCIVCQPGFRVSEDGQQCDDVDECLVSDVCHGQLCLNTPGSYSCRSCGAGLQLSEDGY
GCEDIDECETPGVCPAGVCTNTEGSFSCMACDPGFTVAPNGLSCEDVNECEDQSLCVEGQ
CTNTIGSYSCFCPDGLEMVDGTSCRDINECLTVMGICGEGDCVNTKGSYTCMCPDGFTTV
DGRIGCQDVNECEKDNACIRGECINTDGSFLCLCEAGFKFDTDTADCEDQNECKEFGSSV
CGTWRCENTIGSYRCFMGCQPGLQGDDASDCDIDECVNETMCGNHSFCENTDGSFRCQCD
QGYNNPPGDMSKCVDVNECEMSLALCGEALCENFDGSFLCICPNDNEEFDPLTSQCRSLA
NSMPAPGVPPSASSADERKECYYNLNDANFCDNVLSRNSTKQECCCTVGAGWGDNCEIHA
CPLQGRDDFNQLCPHGTGLLPQLLSSSQNLGEHRPYIDANECEMFGSDICKNGQCLNLFS
TYTCYCRSGFYYDNIRLECVDYDECGFGTACENGACVNTAGSFNCFCSPPLVLDSTRRRC
IGLNTTEETIDSDHDVHMDICWQRLEGDNVCAKPLQDRRTTYTECCCLFGIAWSEQCAFC
PQKDSDDYAVMCNLPREGGRDSLRERPGYEYGMEGPEDPAEPFVPPYWDSYGGPSGPYDI
PEGVPLFNDNDYGVQQPPSRVPIARPREQQPRPLDPYAGRYDAFEGLRAEECGILNGCEN
GRCVRVREGYTCDCFDGYELDLNKMACLDINECEDISDKVPLCQNGLCSNTEGSYKCTCL
TGFLASAEPHRCIPEIPASGLLETGN
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatggacctcgcaggatttggtgttttgatgcttttggctgttgcgctggtg
caaattagtgacagtcacaaggacacaacaggtgggaggaaagagggtgcaggggcagcc
caggcggtgtcgaacaagcagcaatcccgggtgaggagtcaaggtcactcgccaagggaa
ccagaggacgatgcatccccggaaccatccagtgaaacttctcctgggaccagccggtca
atgactcttgtccgacttcccaggggcacatcaccccacggggatggcaggcacacatcc
aaagcaggaccggctcatgctgcaggcgtctcccgggaagaccccgtctctgcgccgcgg
gatggtgcgctgcgcaccgccagacacccgggcagcccgcagcacaggagcggagtgaac
cggaggcagagcagcaagatcggctctgccagcacaaggagacttgttgggcctaatgtc
tgtggaggtcagcagtgctgctcaggctgggctttggcaccaggaactaatcgctgcata
aaacctgactgccagcccccctgccagaaccgtggctcctgcagccggccacagacctgc
gtgtgtcgctcaggcttccaggggccccgctgtgaggaggtggctccagagcaggtgtac
atccgtgatggaggagccctgaggcgcgttcaacccgggaccaaccctttccagagagac
caaccgcggagaaggccgtcagaaaggcaggccatcgataccacgaaggtccagacccca
cgacctgcgaccaccagactgcctgtgactcaagtgagacggggacctcctgactcctcc
cctcagcagactgggacctcccgcactgtgaaacgttatccatcatcttctgggccaata
acctccaacgctctacccaatggcaacggctacgctaatggccacggcagcgagcacaga
aacaggcacggacacaggaatgggcctagcaacgggcaccacaacactaacaggcccacc
agcgacaggcagctgcaagggcagttcaacaatgcactctcaccagcaggggccaacctc
acctccaacctggaccgcattaagatcgtcttcacgcccatggtgtgccgcagggtgtgc
agcggcgggcgatgctacaacagctgtgagaagggagacatgaccacggtctacagcgag
aaccagcagcagcagcagcagcggcagcagccaaagaacccgggctaccgactctttttc
tgtcagattccctgtctaaatggaggccgatgcattggcagggacatgtgctggtgtcca
tcaaactcaacggggaagttttgccacctgccagtcccacctcctgccaggcccacccct
aacaaggaagcaagccaccatggacccaaaactccctcccgctccatgtacactttacca
ctgtccaatcagcaagtatccctccacccatccttggtgaacgtccacattcagcaccct
gcagactccgaagtccatatccaccaagtagctcgggtgcagcctgggcagagaccgacc
ctcagcgatggggctcactctgtgcagcagcgctcccagcctgggaatggacatgaacac
accagtgagcataacagcaggcatccacaaaccagtgggaatgggcatggccacgccaga
cagcacaacaatcagaatggaccagttggaagatgctttcaggaaacagtcgatggacag
tgtggcaagcctctgccaggccttaccaaacaggatgattgctgtggaagtgtgggcacc
tcctggggtctcaacatgtgccaaaagtgtccagcaaaacctgcatatgcagtgattcga
aacggacaagtggaatgttccaaaggattcaaacggatgaatctcacacactgtcaagac
gtcaatgagtgcctgctgcctgggctctgtaagcacgctgaatgtctcaacaccaaagga
agcttcaggtgcatctgtaaaccaggcttctttttagaccctgacaggagccattgtgtc
tcggacaaggctgtgtctgaccagaaggcgttctgctaccggtccgtgtcagcgagttca
tgctctctgccgatggttcatcacatcaccaagcaaatctgctgctgcagccgcgtgggc
aaggcctggggccccgggtgtgaccgctgtcctctgccgggatcagaccatttcaaggag
atctgcccagcgggtcacggatacacgtactcgctctctgatgtgcagatttctgtcacg
cggctcggggaagatgatctgcagagcacgggagtgtcatgggaggaggagagccccact
ttctctctgcctcaagtacccttatacccggagaaccctgaaacgccacaagcaccccgg
gaccctcagactcctcagcatcctctccatccctctcacccagacagggagacacctaaa
gagcgggaagatacggaaattctgagcccaccagccgttgtgactgactcaccgctgaaa
gatccagagacttctccagactcctccatcatcaaccagaggccggattcagaggacacg
acccacacagtttcagccacaggcattgacaagtgtgccaccacccccaccatatgtggc
cgcgggaaatgtatccctgtgcagactggctacacctgccactgcgagtcgggattcaat
ctcagcgcactgcagaccaactgcattgatgtgaatgagtgtgacgaggagccatgtgac
gggaagggccgctgtattaacagctatggatcctatacctgttactgccacagtggctac
agccaggtgatcactcagaacaggaagttctgtcaagacattaacgagtgcagcatgccc
aacaagtgccagaatggtgactgcgtcaacacagaaggatcttacacctgtgaatgcaac
agtggctacgccaagtcttggaaaggccaatgcgaagatgtggatgagtgcagggacccc
agctcctgtcccaacggggtctgcgtcaacactcttggctccttcgaatgccaggactgc
ggccctgggttcaggcccgtcaatgagagatgtgtggatgtaaacgagtgcttgaaccaa
acagcatgcagtcatggaagctgtgtcaacatcgagggctcctacaggtgcaactgtttc
cagggatacaaactctcaccggacaatatatgcgaagatgtggatgagtgtgcgcttcct
ggagtttgtctccacggccgctgtgtcaatctggacggcacctacaaatgcacctgtaac
catggttaccaagtcatctcagacggcgcagcctgcgaagatgtcaacgagtgcgcaact
ggtaatgtgtgccctgcgggaatttgcatcaacactgcaggttcttacacttgccaggat
tgcaggcctgggtttggaccatctgctgatggactgagatgtgaagacgtgaatgagtgt
gcccagggtgacttgtgtcttggtggggtgtgtgccaacacggagggatcctacacctgt
accagatgtaaggctggctacagagtgtctcaagaccggcagaggtgtgaagatgttgac
gagtgccagtccgtgtctccctgtgccaatgggatctgtctgaactcggaaggctcttac
acctgtgagaactgccccaccgggtacagggtatcatatgacggagagatctgtcaagat
attaacgagtgcgcgctgccaaccacatgcccccagggaacatgtacgaacacagatggc
tccttcacgtgtatcgtctgccaacctggattcagagtctctgaggatggacaacagtgt
gatgatgtggatgagtgcttggtgtctgacgtgtgccatggccagctgtgcttgaacacc
ccaggttcctactcctgcaggagctgcggagccggcctgcaactgtctgaggatggttac
ggctgtgaagacattgatgagtgtgagaccccaggtgtgtgtcccgcgggtgtgtgcacc
aacacagagggctccttctcctgcatggcctgcgacccgggcttcactgtggctcctaac
gggctctcgtgtgaagatgtgaatgaatgtgaggaccaaagtctgtgtgtagaaggccag
tgtaccaacaccatcggttcctatagctgtttctgccccgatggtctggagatggtggat
gggacgtcctgcagagatatcaatgaatgtttaaccgtcatggggatctgtggtgaagga
gactgtgtgaacactaagggctcctacacatgcatgtgccctgatggattcaccactgtc
gatgggaggatcggctgccaagatgtgaatgaatgcgaaaaagacaatgcgtgcatccgg
ggcgaatgtatcaacactgacggctcgttcttgtgcttgtgtgaggctggctttaagttt
gacaccgacacggctgactgcgaagaccagaatgagtgcaaggagtttgggagctcagtg
tgtggtacctggcgctgcgaaaacaccatcggctcctaccgctgcttcatgggctgccag
cctggcctccagggagacgacgcctcggactgtgatattgatgaatgtgtcaatgaaacc
atgtgtgggaaccacagcttctgcgagaacacggatggctccttccgctgccagtgtgac
caaggctacaacaacccccccggagacatgagcaaatgtgtcgatgtgaacgagtgtgag
atgagcttggcgctgtgcggggaggccctgtgtgagaacttcgatggcagcttcctgtgc
atctgccccaacgacaatgaggaatttgatcccctcaccagccagtgccgctccctggct
aactcgatgcctgctcctggcgtccctccatcagcttcctcagccgacgagaggaaggag
tgttactacaacttgaacgacgccaacttctgcgacaacgtcttgtctcgcaacagcacc
aagcaggagtgctgctgcacagtgggggccggctggggggacaactgcgagatccacgcc
tgtcctctgcaaggaagagatgattttaaccagttgtgccctcacggcactggattatta
ccccagctcttgtcctcttcacaaaacctgggagaacaccgcccttacatagatgcaaat
gagtgtgagatgtttggatcggacatttgtaagaacggacaatgtttaaatctattttcc
acctatacctgctactgtcgctccggattctactatgacaacatccggcttgagtgcgtg
gattacgatgagtgtggatttgggaccgcctgtgagaacggagcgtgtgtgaacacggcc
ggctctttcaactgtttctgcagccctccgttagtcctggacagcacgaggcggcgctgc
atcggcctcaacaccacagaagaaaccattgactctgaccacgatgtgcacatggatatt
tgctggcagcgtctggagggggacaacgtatgcgcaaagccccttcaggaccgcagaact
acatacactgaatgctgctgcctgtttggcatcgcttggagtgaacagtgtgccttctgt
ccccaaaaagactcggacgactacgcagtgatgtgcaacctgcctcgggaaggaggaagg
gacagtctgcgagagcggccagggtatgagtatggaatggaggggccggaggatcctgcg
gagccttttgttcctccgtactgggacagttatggcggcccctcaggaccctatgacatt
ccagagggagttcctctcttcaacgacaacgactacggcgtgcaacagccaccctcccgt
gtgcccattgcaagaccacgggagcagcagccacggcctttggacccctacgctgggcgc
tacgatgcctttgagggtctccgagcggaggagtgtggaatcctgaacggctgtgaaaat
ggccgctgcgttcgtgtgcgagaaggttacacctgcgactgctttgacggttacgaactt
gacctcaacaagatggcctgtttagacataaacgagtgtgaggacatcagtgacaaggtg
cccttgtgtcagaacgggctgtgcagcaacacagagggctcgtacaagtgcacctgtctg
accggcttcttggcctccgcagagccgcacagatgcatcccagagatcccagcgtctggg
cttctggagacaggaaactga
DBGET
integrated database retrieval system
