Trematomus bernacchii (emerald rockcod): 117478266
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Entry
117478266 CDS
T09643
Symbol
efna1a
Name
(RefSeq) ephrin-A1a isoform X1
KO
K05462
ephrin-A
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117478266 (efna1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tben04052
]
117478266 (efna1a)
00536 Glycosaminoglycan binding proteins [BR:
tben00536
]
117478266 (efna1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tben00537
]
117478266 (efna1a)
Cytokines and neuropeptides [BR:
tben04052
]
Cytokines
Growth factors (RTK binding)
117478266 (efna1a)
Glycosaminoglycan binding proteins [BR:
tben00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117478266 (efna1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tben00537
]
Others
117478266 (efna1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
117478266
NCBI-ProteinID:
XP_033981136
LinkDB
All DBs
Position
Unknown
AA seq
227 aa
AA seq
DB search
MDLVWIVGFVVSVCAWFSSAERHSVYWNSTNPKFLKDDYTVEVKLNDYLDIVCPHYPEGE
VPLLDAERYVLYMVEREDFDICKPQSYDQMRWECGHPFAPHAAEKFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGKECLRLKVDVVAVDGSQEARVDRGGTGGAAVGAGGGVHNPT
NRLPPADDPVVVLPDVQKSARSNSAVTASSLSILSLLVPFSLLLLLH
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtttggattgtgggcttcgttgtgagcgtctgcgcctggttttcttcagcg
gagcgacacagcgtctactggaacagcaccaacccaaagtttctaaaggacgactacact
gttgaggtcaagctcaatgactacctggacatcgtctgcccccattacccagagggtgag
gtgccattgctggatgctgagcgatacgtgctctacatggtggagcgtgaggacttcgac
atctgcaagcctcagtcatacgaccagatgcgttgggagtgcggccatccatttgctcct
cacgccgctgaaaagttctcggaaaagttccaacgttttactccctttactctgggaaag
gagttccgccaaggagaaagctactattatatctccaaacctttgcaccaccatggaaag
gagtgtctcaggctcaaggtggacgtcgtagccgttgatggctctcaagaagccagagtg
gatagaggaggcacaggtggggctgcagttggagccgggggcggggttcacaacccgacc
aacagactgcctccagcagatgacccagtggtagtcctgccagacgtccagaagagtgca
cggtcaaactctgcagtgacggcttcctccctctcgatcctctcactgctagttccattt
tcattactgcttttgttgcactga
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