Trematomus bernacchii (emerald rockcod): 117478275
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Entry
117478275 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: partitioning defective 6 homolog gamma-like
KO
K06093
partitioning defective protein 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
tben04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117478275
09144 Cellular community - eukaryotes
04530 Tight junction
117478275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117478275
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
117478275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
117478275
NCBI-ProteinID:
XP_033981147
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MNRSFNKSQPLRNAECNAVEVKSKYGAEFRRFSVDRIKPGKFEEFYKLILHIHRIANMEV
MIGYADIHGDLLPINNDDNFCKAVSTAHPLLRIFIQRQEEIDYASYGSNTLTRRKKPVVA
LRNNDINRKRPHIRIGMPQDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTS
VRVTPHGLEKVPGIFISRLVPGGLAESTGLLAVNDEVLEVNGIEVTGKSLDQVTDMMIAN
SHNLIVTVKPVNQRNNVVRSSRISGSSGQSSDSSGSTGYPSLSVASVGMISSGAPGYQDD
LESDEDTDIVIENSIKRPSQRSNASLASSVSRTHQQTPTTASGQAAPPSPPTRPSSVVST
ASFHSQPSLNGVSQHQHQHHHLHHQSSLSYQLHRDLSLHHNPHQQAQLRHHQIQPVHHSS
NPALRHSNGSLHKILSSLKTDPRHSLALPRGGVEEDGTVITL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagctttaataagtcgcaacctctgcggaatgcggagtgtaacgcagtagaa
gtgaaaagcaagtatggggcagaatttcgccggttttcggtggaccggatcaagcctggc
aagttcgaagagttttacaagctcatcctgcacattcaccgcatcgccaatatggaggtg
atgatcggctatgctgacatccacggtgatttgctgcccatcaacaacgacgacaacttc
tgcaaggcggtgtcaacggctcatccactgctcaggatcttcatacagagacaagaagag
atcgactatgccagctatggttccaacactttaacccgtaggaagaaaccagtggttgca
ctgcgcaacaatgacatcaaccgcaagcgaccacacatccgcatcggcatgccgcaggac
ttccggcccgtctcctccatcattgatgtggacatcctacctgagtctcaccggcgtgtc
cgactgtatcgccacggctcggacaaacccctgggcttttacatcagagatggaaccagc
gtccgggtgaccccccacgggctggagaaagtccccggcatcttcatatctcggctggtg
cctggagggttagcggagagcaccgggctgctggcggtcaatgacgaggtgctggaggtg
aacggcattgaagtgacgggcaagtccttagatcaggtaacagatatgatgatcgccaac
agccacaacctgatcgttacggtcaagccagtgaaccagcggaataatgtggtccgcagc
agcaggatctcagggagttcaggccagtcgtcagacagcagcgggtcgaccggttacccg
agtttgtcagtggcctcagtggggatgatctcctctggagcacctgggtaccaggacgac
ctggagagtgacgaagatacggatattgtcattgagaacagcatcaagcggccgtctcaa
aggtccaatgcttcgctggcgtccagtgtgtctcgcacacatcagcagacaccaacgaca
gcttcgggccaagcggcacctccgagcccccccacacgtccttcatcggtggtctcaacc
gcctccttccactcgcagccgagcctcaatggggtgtcgcagcaccagcaccagcaccat
cacctccaccaccagagcagcctcagctaccagctccacagagacctgagccttcaccac
aacccgcatcaacaggcccagctccgtcaccaccaaatacagcctgtgcatcacagcagc
aacccagccctccgccacagcaatggcagcctgcacaaaatcctcagctccctgaaaacg
gacccacgacacagtctcgcgctgcccaggggcggagtggaggaggacggcaccgtcatt
accctataa
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integrated database retrieval system
