Trematomus bernacchii (emerald rockcod): 117478279
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Entry
117478279 CDS
T09643
Name
(RefSeq) complement C3-like
KO
K03990
complement component 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04145
Phagosome
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117478279
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117478279
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117478279
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117478279
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117478279
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117478279
Peptidases and inhibitors [BR:
tben01002
]
Peptidase inhibitors
Family I39: alpha2M family
117478279
Membrane trafficking [BR:
tben04131
]
Endocytosis
Phagocytosis
Opsonins
117478279
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117478279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TED_complement
A2M_BRD
MG1
A2M
A2M_recep
NTR
MG4
MG3
MG2
C3_CUB2
C3_CUB1
Rib
DUF2087
Motif
Other DBs
NCBI-GeneID:
117478279
NCBI-ProteinID:
XP_033981155
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MRKTLLWLLASLAFVSLTSLADGAPLEVMSAPNLLRVGTAENVFVECQDCTGADQMVEIY
VMNHPTKNTRLATASVTLTRTNNFQALVKIMIPTGDFSKDPSIKQYVYLQAMFPERLLEK
VVLVSFQSGYIFIQTDKTLYTPNSRVRFRMFAVTPRMEPVDRDDDNQENASIAIEIVTPE
GIILPLDPVSLKSGIHSGDYQLAQIVSLGLWKIVTKFRSNTQQSFQAEFEVKEYVLPRFE
VKLNPTSPFFYVDDQELTVNIKATYLFDQEVNGMAYVVFGVIHDGQKKSFPSSLQRVQIE
GGVGAVTLRREHITTTFGNIEELVTKSIFVAVSVLTENGGEMVEAELRNIQIVKSPYTIH
FKKTPKYFKPGMTFEVVVEVVYPDNTPAQGVAIVVEPGYVNGITANNGMARLTINTRDPQ
LTITARTNDPRISSIRQASATMTALPYITQSNNYIHIGVDSADVELGNNLKINLNINRRE
SHDYDITYLLMSRGQLVLKGRYKTRGQVLISLMVPITKDMLPSFRIIAYYHTNGNEVVSD
SVWVDVKDSCMGSLKLEQLRPAPSHEPRKMFRLKVTGDPGARVGLLAVDQVYVLKNKHRL
TQKKVWDIVEKYDTGCTPGGGKDGMSVFYDAGLLFESNTASGTPYRQELKCPAPSRWKRE
TTIMDVRTSLSEEDDNSYIDSNEIVSRTNFPESWLWSDITLPACPGRNPCDTTSVTKTIP
LQDSITTWQFTGISLSTTHGICVGEPLEVIVRKEFFIDLMLPYSAVRGEQLEVKAILHNY
SPDPATVRVDLIEEDYVCSSASKRGKYRQEVQIGAQTTRYVPFIIIPMKEGEFRIEVKAA
VHNSSLNDGIMKMLRVVPEGVLVKDPMIVILDPTNKGVDGEQEEILNSRIAMTDLVPNTP
TSTQISVTGREQVSALVENAVSGNTMGTLIKHPAGNAESNMMRMTLPLIAATYLDKTNQW
ETVGFQKRNEALQHIRTGYIQELLYRKNDGSFAVFPHSSSSSWLTAYVAKVFAMANNLVT
VDRPHICEAIKFLILNAQQPNGLFREVGTAILGEMMGDVRGADSDASMTAFCLIALQESR
TLCAASVGSLPGSISKAVAYLERRLPSLTNPYAVAMTSYAMANENKMNREILYKFASPEL
NHWPTPKGGVYTLEATAYALLALVKAQAFEDARPVVRWFNEQQRVGGGYGSTQATIMVYQ
AISEYWSSAIEPEYDLNVCILLPGMARPFRYNFNRENHYGTRTSQINVINQNVTVTAKGS
GEATVTMVSLYYILPKQKESDCQKFNLSVQLIPEKMDEDEKIYKLRIEVLYKDKERDAAM
SILDIGLLTGFTVNTKDLDLLSKGHGRTIAKYEMDKVLSERGSLIIYLDKVSHTQPEEII
FRVHQKMKVGVLQPAAVSVYEYYEQTQCVQFYHPERKGGPLLQLCRDDECTCAEENCSMQ
KKANISNDQRTAKACESIPTSKINFVFKVKLEVFEDGLSTDIYTMRVLEVIKEGTFDEGP
LYQLRTFLSFLHCRESLDLVVGKTYLIMGTSDDIHRDDAHRTYQYVLGERTWIEYWPTEA
ECQADEHRPTCLGIEQMVQQYQLFGCQQR
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagactctgctgtggctgctggcctctctggccttcgtctccctgacttctctt
gctgatggagctccattggaggtgatgtctgcccccaacttgttgagggtaggaacagca
gaaaacgtttttgtggagtgtcaggactgcacaggtgcagaccaaatggtggaaatctat
gtgatgaaccatccaaccaaaaacacaaggctggcaactgcatctgtgacgcttaccaga
acaaataacttccaggcgctggtaaagataatgatccctactggagacttcagtaaggat
cccagcattaagcagtatgtgtatctgcaagctatgttccctgaacgactgcttgagaag
gttgtcctggtctcctttcagtctgggtatatcttcatccaaactgacaagaccctctac
acccccaacagcagagttcgtttcaggatgtttgctgttactccccgtatggagcccgtg
gacagggatgacgacaaccaagagaatgcttctattgccattgagattgtgacccctgaa
ggcatcattttaccacttgatccagtctctttaaaatcagggatccactctggagattac
caactcgctcaaattgtcagtctcggactgtggaagatcgtcacgaagttccggagcaac
acacagcagagctttcaagcagagtttgaggtcaaagaatatgtgcttccccgttttgag
gttaaactgaatcctacgagccctttcttctacgtggacgaccaagagctcacagtcaac
attaaagccacgtatttgtttgatcaagaggtgaatgggatggcctacgttgtgtttggg
gtcatacatgatggtcaaaagaagagctttcccagttctcttcagagagtgcagattgag
ggaggtgttggagctgtcacgctgaggagagagcacatcacaacgaccttcggaaacatt
gaagaactggtgacgaaatccatatttgtagctgtcagtgtgctaacggagaacggtggt
gaaatggtggaggcagagttgagaaatattcagattgtcaaatcaccttacaccatccac
ttcaagaaaactcccaaatattttaaaccaggaatgaccttcgaagttgtggtcgaagtt
gtgtatcctgacaacactccggcacaaggtgttgctattgtggttgaaccaggctatgtg
aatggcatcaccgcaaacaatggcatggcaaggctaacaatcaatacaagggacccacaa
ctaacaatcactgcaaggacgaatgatcctcgtatttcatcgatcagacaagcatcagcc
accatgacagctctcccatatattacccaaagcaacaactatatccacataggtgtggat
tcagctgatgtagaattaggaaataacctgaaaatcaacctcaacatcaacaggcgggaa
agtcatgactatgacatcacatacctgttaatgagcagaggtcagctggtgctaaaaggc
cgatacaagacaagaggtcaagtactgatctccctgatggttcccattaccaaagacatg
ctgccatcgttccgcatcatagcctattaccacacaaatgggaatgaagtggtatcagac
tctgtttgggtggatgtaaaagactcctgcatgggctcgctgaagctggaacaattgaga
cccgctccatcccatgagcctcgcaagatgtttcgtctgaaggttacaggagacccaggg
gccagagttggactgttggcagtggaccaagtctatgtccttaagaacaagcaccgcctc
acacagaaaaaggtgtgggacatcgtagagaagtacgacacaggttgcacaccaggtgga
gggaaggacggtatgagtgtgttctacgatgctgggctgctgtttgagtccaacacggct
tctgggactccctacagacaagaattgaaatgtccggcaccgagcaggtggaaacgagag
actacaatcatggatgtcagaaccagcttaagtgaggaggatgacaacagttacattgac
agcaatgaaattgtttctcgcaccaacttccctgaaagttggctgtggtcagatatcaca
cttcctgcttgccctggacgaaacccatgtgataccacatcagtgacaaaaacaattcca
ctgcaagattcaatcaccacctggcagtttactggcattagtctgtcaacaactcacgga
atctgtgttggtgagccgttagaggtaattgtccggaaggaattcttcattgatctcatg
ctgccatactctgctgtccggggagagcagctggaagttaaggcaatcctgcacaactac
agccccgatcctgcaactgtgcgggttgatctgattgaggaggattatgtgtgcagttcg
gcttcaaagcgtggaaagtatcgccaggaggtccaaattggggctcaaactacacgatat
gtgcccttcatcatcattcccatgaaagaaggagaattccgcattgaggtcaaagctgct
gttcacaattcgtcactaaatgatggaattatgaagatgctgcgggtggtgcctgaaggt
gtactagtaaaagatcctatgatagtaattctagaccccactaataaaggtgtagatggt
gaacaagaagaaattctcaacagtagaattgccatgacagatttggttccaaacacacca
acaagcacacagatctctgtgacagggagagaacaagtgtctgccctcgtggagaacgct
gttagcgggaacactatgggtactctcatcaaacaccccgctggcaatgcagagtcgaac
atgatgagaatgaccctacctctcattgcagccacatatttagacaaaaccaaccagtgg
gaaactgtgggctttcagaaacgtaatgaagccctccaacacatcaggactggctacatc
caagagcttctctaccggaaaaatgatgggtcttttgctgtgtttccacatagctcaagt
agctcttggttgacggcctatgttgccaaagtgtttgccatggcaaacaatctggtgaca
gtggacaggccacacatctgtgaggccatcaagtttctgattctcaacgcacagcaacct
aatggcttatttcgagaagttggaacagcgatcctgggagagatgatgggtgatgtgcgt
ggcgcagattcagatgcctccatgacggccttctgcctcattgctttgcaggagtcacga
acgctatgtgctgccagtgttggtagtctaccaggcagtataagcaaagcggtggcctat
ctggaaaggcgtctgcccagcctcaccaacccatatgctgttgccatgacatcatatgcc
atggccaatgaaaacaaaatgaaccgcgagatcctctacaagtttgcttccccagagttg
aaccactggccgacgcctaagggaggtgtctacacactggaggctacggcttacgctctt
ctcgctctggtcaaggcccaggcttttgaagatgccagacctgttgtgagatggttcaat
gaacagcagagagttggcggaggctatggatcgactcaggccaccattatggtgtaccag
gctatatccgagtactggtccagtgctatagaaccagaatatgatctgaacgtgtgcatt
ttgttgccgggcatggcaaggcctttcaggtacaacttcaacagggaaaaccactatggc
acaaggacatctcaaatcaatgttatcaaccaaaacgtgacagtgactgccaagggttca
ggagaagcaacagtgacaatggtgtcgctgtactacattctacctaaacaaaaggaaagt
gattgtcagaagtttaacctgtcagtgcagctcatcccagaaaaaatggatgaggacgag
aagatatacaagctgaggatagaggttttgtataaggacaaggaaagagatgcagcaatg
tcaattttggatattggcttgctaaccggcttcaccgttaacacaaaggacttggactta
ttgtccaaaggacatggccgcaccattgcaaaatatgagatggacaaagtcctgtcagaa
agaggctcactcatcatctacctggacaaggtttctcacacacaaccagaagaaatcatt
tttagggttcatcagaagatgaaagtgggcgtcttacaaccagcggctgtgtctgtctat
gaatactatgagcaaacacagtgtgtgcagttctaccatccggagaggaaaggtggaccg
ctactgcagctctgcagagatgatgaatgcacatgtgctgaagagaattgcagtatgcag
aagaaggcgaacatcagcaatgatcagcgcacagctaaggcttgtgagagtataccaacc
agcaaaatcaattttgtgttcaaagtgaaactggaagtgtttgaagacggtttgtccaca
gacatttacacaatgcgtgtactggaagtcatcaaagaaggaacgtttgatgagggtcct
ctgtatcaacttcgcacattcctcagttttctgcactgcagggagtctttagatttggtt
gttggtaaaacgtaccttatcatgggaacatcagatgacattcacagagatgatgcacat
cgaacctatcagtatgtacttggagaaagaacctggatcgagtactggcccacagaagcc
gagtgtcaagctgatgaacacagacctacctgtttgggcattgagcagatggttcagcag
taccaactctttggatgtcagcagcggtga
DBGET
integrated database retrieval system
