Trematomus bernacchii (emerald rockcod): 117478296
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Entry
117478296 CDS
T09643
Symbol
gtf2h4
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03022
Basal transcription factors
tben03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117478296 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
117478296 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117478296 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
tben03400
]
117478296 (gtf2h4)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117478296 (gtf2h4)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117478296 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
117478296
NCBI-ProteinID:
XP_033981179
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MKLRVQLQCKNLHEYLRELSPEVLDRLYDHPATCLAVYRELPSLAKNYVMRMLFLDQPLP
QAALALWVKIDSQKDHDECVSVLAGLRLWHSQQLQGGLQGYILNPVFKDNLRIALLGGGK
AWADEGSSLGPDRHARTSXVLDRYAMERWEVILQFMVGSPGAAVSQDLALLLVQAGLMKS
EAGEAPYITSAGFQFLLLDTASQLWYFTLQYLNTAQSRGMELVEILSFLFQLSFSTLGRD
YSVEGMSDSLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTSTSSTLATPGTGD
AGFIVVETNYRLYAYTDSELQIALVALFSEMLYRFPNVVVAQVTRESVQQAIANGITAQQ
IIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLTFTEGVLYNQFLSQVDFEVLRD
RAQGLGCLVWQDVAHRVLVVSPQGHSEVKRFWKRQKSTT
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgggtccagctgcagtgtaagaacctgcatgagtacctgagggagctgagc
ccggaggtcctggacagactgtacgaccacccggccacatgcctggctgtgtacagggaa
ctcccctctttggccaagaactatgtgatgcgcatgctgttcctggatcagcccctccca
caggcagctctggcgttatgggtgaaaatagacagtcagaaggatcacgatgagtgtgtg
tcggtgttggcaggactccgcctgtggcacagtcagcagctgcaggggggtctgcaggga
tatattttaaatccagtgttcaaagacaacctgaggatcgctctgctgggcgggggcaaa
gcctgggcggatgagggcagctctctgggtccggaccgccacgcgcggacatcctgagtc
ctggaccgctacgccatggagcgctgggaggtcatcctgcagttcatggtgggctccccc
ggggccgccgtcagccaggacctcgccctgctgctcgtacaggccggcctcatgaagagt
gaggccggcgaggcgccctacatcacctccgctgggttccagttcctcctgctggacacc
gcctctcagctgtggtacttcaccctccagtacctgaacactgcccagtcccgagggatg
gagctggtggagatcctgtccttcttgttccagctcagcttctccactctgggcagagat
tactcggtggagggcatgagcgactcgctgctcaccttcctgcagcacctgagggagttc
ggactggtgttccagaggaagaggaagtcgcggcggtactaccccaccagactggccatc
actctggctgcaggggtcacctccacctcctccaccctggccacgcctgggaccggagac
gcaggcttcatcgtcgtagaaaccaattaccgtctctacgcatacacagactcagagctg
cagatcgctctggtggctctcttcagcgagatgctctatcgcttccccaacgtcgtggtt
gcccaggtaacaagggagtcagtgcagcaagccatcgccaacggcatcacagcacaacag
attatccacttcctacggaccagagcgcaccctgtcatgctcaaacagaccccggtgctg
ccccccaccatcacagatcagatcagactgtgggagctggagagagaccgcctgacgttc
acagagggagtgctctacaaccagttcctctcgcaggtggacttcgaggtgctgcgggac
agagctcagggcctgggttgcctggtgtggcaggacgtggctcacagggtgctggtggtg
agtccacagggacacagcgaggtgaagaggttctggaaaagacagaagtccaccacgtag
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integrated database retrieval system
