Trematomus bernacchii (emerald rockcod): 117478323
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Entry
117478323 CDS
T09643
Name
(RefSeq) POU domain, class 2, transcription factor 1
KO
K09364
POU domain transcription factor, class 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117478323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117478323
03021 Transcription machinery [BR:
tben03021
]
117478323
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117478323
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
117478323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
117478323
NCBI-ProteinID:
XP_033981212
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSSLAPRSSPDIRMSKAAEEEKPGAEYPGDSSDSDRN
SPDDQVQPMKTSPCSISPTPAGSKGKSEESSEIVRSTIPALTPSQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQLQQLQQQQQQQQQLQQQQQQQHHHTQLMLAGSQLAGLAALLPAQQQ
LLLQQAQAQLLAAAVQQSHAAHAAHAAAQQQANQHHQQSLSQSQQQQIKQEQTVQVPPPQ
QMALTQPIQLTAQDIQQLLQLQQLVLMPGHHLQGPAQFLLSQPTQAQQQQHALLSTPNLI
QLPQQSQGGLLTSPPRLGLQAQREKSSDVLGGSSGGSIVATSTGGVVTSVGIPSASSSSM
ASSLTPGLTSGSHGGHGGHGGHLGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGVAMGK
LYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAEIMAVDSMLPSPSSLSSPMLGI
EGLSGRRRKKRTSIETNVRVALERNFCMNNKPNSEEILLMADQLNMEKEVIRVWFCNRRQ
KEKRINPSSSTTPPLPCQTSPVVSHRAPCYSPHMISSHGLSQVTTCLSTTASSPSASCPM
TPVSSAAAGSTSSSVTSPPHSTASPAPPSFAGALGFNTGNTMMGLSTGMTQALIGSNSLA
TMQALVSSSGQLPITSLDGGAAHMLLGGPGGTGIPPSFRSSLFLNHPALLPMVTGSMATA
STTAMSLASSSSGGGGPRLPFPQSPPPGTSSLMSPTTCHEESASPCSSPASFCSFSEASP
PPLGGAMAE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccggtccccttcgtctttcagagaacagcgtccgacttcagcgcc
tggagactcaagtcctcgctggctccgcggtccagccccgatatcaggatgtctaaagca
gcagaggaggagaagcctggggctgagtatccaggggacagttcagactctgacaggaac
agccctgatgaccaggttcagccgatgaaaacaagcccctgcagcatctcccccacaccg
gctggcagcaagggaaagagcgaggagagctctgagatcgtccgtagcaccattcctgct
ctaacaccttcccaacagcagcagcagcagcagcagcagcagcaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacagcagcaacaacaactacaacaactacaacaa
cagcaacaacagcaacaacaactacaacaacaacaacagcaacagcaccaccacacacag
ctgatgctggctggtagtcagctagcagggcttgccgctctcctcccggcccagcagcag
cttctcctccagcaggctcaggctcagctcctggccgccgccgtgcagcagtcccacgcc
gctcacgctgcccacgccgccgcgcagcaacaagccaaccagcaccaccagcagagctta
tcacaatcccagcagcagcaaatcaagcaggaacaaacggtccaagtcccgcctccacag
cagatggctctgacgcagccaatccagctcactgcccaggacatccagcagctgttgcag
ctccagcagctggttctgatgcccggtcatcatctccagggtcccgctcagttcctcctg
tctcagcccacgcaggcacagcagcagcagcatgctttactctcgacaccaaatctgatc
cagctacctcagcaaagccaaggaggactactgacaagtccacctcgcctgggactccaa
gcacagagggagaagagcagcgatgtgctcggtgggagcagcggtggctctatcgttgcc
accagcaccggcggagttgtgacatctgttggaatcccttcagcctccagcagctccatg
gcctcctcattgacgcctggcttaacttctggaagtcacgggggtcacgggggtcatggg
ggtcacttgggcgaagaacccagcgatctggaggagctggagcagtttgcccgcaccttc
aaacaacgacgtatcaagctgggattcacccagggagacgtcggtgttgctatgggcaaa
ctgtacggaaacgacttcagccagaccaccatctcccgattcgaagccctcaatctgagc
tttaagaacatgtgcaaactgaaaccgctgctcgagaagtggctgaatgatgcagaaatc
atggcggtggacagcatgctgccgagcccctcctctctctcctcccccatgctgggcatc
gagggtctgtcaggccgtcgcaggaagaaacgcactagcatcgagaccaacgtgcgagtg
gccttagagcgcaacttctgcatgaacaataagcctaactcggaggagatcttgctcatg
gcggaccagctcaacatggagaaggaagtgattcgtgtttggttctgcaaccgcaggcag
aaagagaagcgcatcaacccctccagcagcaccacccctcccctgccctgccagacctcg
cctgttgtgtcacacagagccccctgctacagcccgcacatgatctcgagtcatggtctg
tcccaggtcaccacctgtctcagcacaacagcctccagcccttcggcctcctgtcccatg
actcccgtcagctcggccgcagcaggctccacctcttcttctgtgacctccccccctcat
agcacagctagccccgcccctcccagctttgccggggcccttgggttcaacaccgggaac
acaatgatgggactaagcacagggatgacccaggccctcattggcagcaattccctggct
accatgcaagccctagtgtcgagcagtggtcagctgcccatcaccagtctggatgggggg
gcagcccacatgctcctgggtgggcctgggggtacgggcatccctccatcctttcgctcc
tcactcttcctcaatcatccagccctcctccccatggtgacgggctccatggcgacagcc
tccacgactgccatgtccctggccagcagcagcagcgggggtggtggcccgagactcccc
ttcccccagtccccccccccaggcaccagcagcctcatgagccccaccacgtgccacgag
gagtccgcttctccgtgttcaagtcccgcctctttctgttccttcagcgaagcctcacct
ccgcccctgggaggggccatggccgagtga
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integrated database retrieval system
