Trematomus bernacchii (emerald rockcod): 117478337
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Entry
117478337 CDS
T09643
Symbol
hoxa3a
Name
(RefSeq) homeobox protein Hox-A3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117478337 (hoxa3a)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
117478337 (hoxa3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
117478337
NCBI-ProteinID:
XP_033981229
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MQKATYYDSSAIYSGYPYQSANGFSYDANQVQYPRASHVESEYHRPACSLQSPDGSVALQ
KPGEMAESCDRTTAIQAAQSKVHPESNQPQVPVSGPPPPSISPGAVSQNTSNGSNQPSAK
NGSPTSATRKHIFPWMKESRQNIKQKPNSSSSSVESCPGDKSPPGSAASKRARTAYTSAQ
LVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGVGMMPSPGGQ
SPRSPVGPGSGVGGGGGYLNSMHSLVNSVPYESQSPTSYNKPHQNAYGMATSYPPPLNNS
LNNCPPSQKRYPGTDSATPEYDAHPLQGNGNYGSHMQGSPVYVGGGYIDSMPNSGTSVFG
LTHLSHPPSTNMDYNGAITMGNSQHHGVCDPTPTYTDLTAHYSQGRIQEAPKLTHL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaggcaacctactacgacagctccgcaatttacagtggctacccatatcaaagc
gcaaatggcttcagttatgatgccaatcaggtccaatatccccgggcctctcatgtggaa
agtgagtaccatcgacctgcctgctccctgcagtctcctgacggctccgtggctctgcag
aagccgggggagatggcggagagctgcgacaggaccacagccattcaggcggcgcagtcc
aaggttcatcccgaaagcaatcaaccgcaggtgccagtgtcaggcccgccccctccgtca
atatcccccggtgctgtcagccaaaacacaagcaacgggtccaaccagcccagtgccaag
aacggctccccgacctctgctactcgcaaacatatcttcccctggatgaaggaatcccgt
cagaacatcaagcagaaacccaacagtagctccagttcagtggagagttgccccggagac
aagagtcctccggggtcagcagcatcgaagagggcccggacagcttacaccagcgcccag
ctagtggagctggagaaggagttccacttcaaccggtacctctgcagacccaggagggtg
gagatggcgaacctgctcaacctcaccgagagacagatcaaaatctggttccagaaccgc
aggatgaaatacaagaaggatcagaaaggcgtcggaatgatgccttcccctggcggacag
tcccctcggagtcccgtgggcccaggctccggggttggcggtggtggaggatacctcaac
tctatgcattctcttgtaaacagtgtaccttacgaatcccagtcgccgacgtcttacaat
aaacctcatcaaaatgcatacggtatggccacgtcatatccccctcctttgaacaactcc
ctcaacaactgccctccctcccagaagcggtatcccgggaccgactcggccacgcccgag
tatgacgcgcatcctcttcaaggcaatggcaactacgggagtcacatgcagggcagcccc
gtttatgtcggtggaggttacatcgactcaatgcccaattctgggacctccgttttcggt
ctgacccatctatcgcacccgccgtccacaaacatggactacaatggagcaatcacaatg
ggtaacagtcagcatcacggagtgtgtgatccgacaccgacgtacacagacctaacagcg
cactactctcagggaagaatccaggaagcgcccaaactgacgcatctgtag
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