Trematomus bernacchii (emerald rockcod): 117478390
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Entry
117478390 CDS
T09643
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04145
Phagosome
tben04814
Motor proteins
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117478390
09142 Cell motility
04814 Motor proteins
117478390
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117478390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117478390
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117478390
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
117478390
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117478390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynein_IC2
WD40_CDC20-Fz
WD40
Beta-prop_EML
WD40_Prp19
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SPT8
Big_2
Motif
Other DBs
NCBI-GeneID:
117478390
NCBI-ProteinID:
XP_033981297
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIRQEKKIKEEERKKKEVRKKSEIQQKRESIPEDSDLDRKR
RETEALLQSIGISPEPSLVPTPLSPSKSLSTPSETGSQDSTDGGAVGRSGFSKNKSQAQT
SRTLQWDTDPSVLQLQADSELGRRMQRLGASKITQVDFLPKEMVAYCKETQTPLNSHLSE
VEEEEEDEEMMEAKPGPESEQQDEDDNRENKEGSFPVLRELTEEERQQILHSSDFQSFFD
CSIRVMERALAEDGNIFFDYSGRDLEDKEGDLGSGSSLSFSRVFYDEHWSKHRVITCLDW
SPQYPELLVASYNNNEDAPHEPDGVALVWNMKFKKATPEYIYHCQSPVVSVGFAKFHPNL
VVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRM
CSWSLDMLSQPQETMELVYNKSKPVAVTGMAFPTGDVNNYVVGSEEGTVYTASRHGSKAG
ICEMFEGHQGPVTGVSCHSAVGTVDFSHLFITSSFDWTVKLWSTKHNKPLYSFEDNADYV
YDVMWSPVHPAVFAAVDGMGRLDLWNLNNDTEVPTASVTIEGASALNRVRWSSGGKEVAV
GDSEGRVWIYDTGELSVTHTDDWSRFARTLMEIRANRADGEEEGPMELDS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataaaagtgacctaaaagcagagctggagcgcaagaagcagcgcctcgcccaa
atcaggcaggaaaaaaagattaaggaggaggagaggaagaagaaagaggtaaggaaaaaa
tcagagatccagcagaagagagagtccatcccagaggattcagacctggaccgtaagcgc
cgcgagactgaggccctgctccagagtatcggcatctcacctgagccttcactagtcccg
acccctctgtccccctccaaatcactgagtacccccagtgagacgggaagccaggattca
actgatggaggagcagtgggcaggtcaggtttctctaaaaacaagtcccaagcacagact
tcaaggacgctgcagtgggacacagacccgtctgtgctgcagctgcaggctgattctgag
ctcgggcgcaggatgcagagactgggagcctctaagatcacacaggtagacttccttccc
aaagagatggtcgcttactgcaaggagacacaaacgcctctcaactcccacctgtctgaa
gtagaggaggaagaggaagatgaggagatgatggaggcgaagccaggccccgagtcggag
caacaggatgaagatgacaacagagaaaacaaagaaggctcctttccagttctgagagag
ctgacggaggaggagaggcagcagatcctgcactcttcagactttcagagtttcttcgac
tgcagcatccgggtgatggagagagctctggccgaagacggaaacatcttcttcgactac
agcggccgggacctggaggacaaggagggagacttgggtagcggctccagtctgtccttc
agccgagttttctacgatgaacactggtccaaacatcgcgtgatcacctgcctcgactgg
tcccctcagtatccagagctgctggttgcctcttacaacaataatgaggatgctcctcat
gaaccggatggtgttgctttagtatggaacatgaaatttaagaaggccacacctgagtac
atctatcactgtcagtctcctgtagtatctgtgggctttgccaagtttcatcccaacctg
gtggtgggggggacttactcgggacagatcgtcctgtgggacaaccgcagtcaccgccgg
acccccgtccagaggacccctctgtctgctgctgctcacactcacccagtgtactgcgtg
aacgtggtcggtacccaaaatgccaacaacctgatcactgtgtctacagacggcaggatg
tgctcctggagtctggatatgctctcccagccacaggagaccatggaactggtgtacaat
aaatccaaacctgtggcggtgacaggcatggcgttccccacgggagacgttaacaactat
gtggtcgggagtgaggagggcactgtgtacactgcatccaggcatggcagcaaagcgggg
atctgtgagatgttcgagggccaccaggggccggtgacgggcgtcagctgccacagcgca
gtgggcaccgtcgacttctcacatctcttcatcacatcctccttcgactggaccgtcaaa
ctctggagcaccaagcacaacaagcctttgtactcgtttgaggacaacgccgactatgtg
tacgacgtcatgtggtcgcccgtgcaccccgccgtgttcgccgccgtggatggcatgggc
cgcttggacctgtggaacctcaacaacgacactgaggtccccactgccagtgtgaccatt
gagggcgcttcagccctgaacagagtgcgctggtcgtcgggggggaaggaggtggctgtg
ggcgactcagagggcagggtctggatctatgatactggagagctgtcagtgactcacacc
gatgattggtcgcgcttcgctcggacgctgatggagatccgtgccaaccgggcggacggc
gaggaggaggggcctatggagctggattcatag
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integrated database retrieval system
