Trematomus bernacchii (emerald rockcod): 117478475
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Entry
117478475 CDS
T09643
Symbol
aqr
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117478475 (aqr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117478475 (aqr)
Spliceosome [BR:
tben03041
]
Complex B
Other components
Prp19-related factors
117478475 (aqr)
Complex C
117478475 (aqr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
DEAD
UvrD_C_2
SLFN-g3_helicase
UvrD-helicase
AAA_16
AAA
Parvo_NS1
AAA_22
PhoH
DnaB_C
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-GeneID:
117478475
NCBI-ProteinID:
XP_033981405
LinkDB
All DBs
Position
Unknown
AA seq
1495 aa
AA seq
DB search
MATKGKETPAKKAAAPSVSQINAEYVTQLANKYWAPHAKNKLPFDPKVLADVYEKEILMS
KFAIRKIMLLEFSQYLENYLWVNYTPKVSSNAYLMSICCIVNEKFRENVPAWEVFKKEPS
HFPFFFKCVMEAVLASEGAGLSLKEQTVLLVFLDHCFNSLEVDLIREQVQQLISLPMWMG
LLPSRLQHELKKVPKLQKFWNLIKKKSDKMEADEAEQAQKERAFLSALIKKFLGVLVSIP
PSGPVSMDKVHYCERFIELMIDLEALLPTRRWFNTVLDDSHLVVSCHLSSLVHREKEGHL
FCQLLDMLKFYTGFEISDQTGTALTEKEMTTLHYDKILSLQRAAFAHFPELQDFALSNVA
AVDTRESLTKHFGHLSPNTLHRVASYLCLLPELPEGQDTTYEKEVLLELLVSRHERRISQ
IEQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLES
TYEIRQDIEDVVWRMKPWQSEYGGVVFGGWARMAQTITSFSIVEVAKPNIGESWPARVRG
DVTVNLNVQDHIKHEWEGLRKHDVCFLITVRPNLPYGTRFDRRQPFVEQTGLVYVRGCEV
QGMLDDKGRVIEEGPDPKPKLRGDARTFRVWLDPNQYQQDMTSSIQSGTEDPYESFNVIM
RRKPKENNFKAVLETIRNLMNTECVVPDWLHDIILGYGDPGSAHYSKMPNQISTLDFNDT
FLSLDHLRSCFPDYTIKVTEDDPELQVFPFRIKFPISKKAEKGKKRKTDEPEEDQSEDKT
LIVEPFVTPNRGPYPYNQPKRNTIQFTPTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQI
ISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYG
RVNYVLARRLELLREVGRLQESLDVPGDVSYTCETAGHFYLYQVISRWEEYMSKVRPKQS
KEVEVQAVAAHFPFHKYFSNAPQPVFKGRSYEEDMDISEGCYRHIKKIFTQLEEFRAFEL
LRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPL
LLQNPEDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTIDLDAQ
GRARASLCNLYNWRYKQLGNLPHVQQLPEFQVPNPGLTFNFQLVNVEDFNGVGESEPNPY
FYQNLAEAEYSVALFMYMRLLGYPADRISILTTYNGQKHLIRDVINQRCAGNPFFSQPNK
VTTVDRFQGQQNDYIILSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFEL
TPVFNQLTARPMQLHIRPHEYYSQEQPRDASGQKDQIIKNMPEMTNMVYNMYMHMIQTSQ
KHRQQQQQQLALPPQQTKPDAVAEEASVSAEEKPEEETPMEQETQEGETNPEPNPQGETN
PEPKPEGEATPEDTSEEKEEEKEEQQEAASHAKMPEHPGRDSDSDEEENEEEQKQ
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaggggaaagaaacccccgctaaaaaggctgcggcgccttcagtgtctcag
attaatgctgaatatgtcacacagttggctaataaatattgggctcctcatgcaaagaat
aagctaccatttgacccaaaggtgttggcagatgtttacgaaaaagagattctcatgtcc
aaatttgccatcagaaaaattatgctgcttgagttcagccagtacctggagaactacctg
tgggtgaactacactcctaaagtgtccagcaatgcctacctaatgtccatttgttgcatc
gtcaacgagaagttcagggagaatgtcccagcgtgggaggtgttcaaaaaggagccgagc
catttccctttcttcttcaaatgtgtgatggaggctgtattggccagtgagggggccggc
ctcagtctgaaggaacaaaccgtgctgctggtcttcctggaccactgcttcaacagtctg
gaggtagatttgatcagagagcaggtgcagcagctcatctctctgcctatgtggatgggc
ctcctaccatccagactccagcacgagcttaagaaagtcccaaagctgcagaaattctgg
aatctaatcaagaagaaatctgataagatggaggctgacgaagctgaacaggcgcagaaa
gagagggcattcctctcagctctcattaaaaagtttctaggagttctcgtgtccatcccg
ccatcagggcctgtatccatggacaaagtacattactgcgaaagattcattgaactcatg
attgatttggaggccctgctgcccaccaggcgttggttcaacaccgtgttggatgactct
cacttggtggtcagctgccacctgtccagtctcgtccacagagagaaggaaggacacctc
ttctgccagttgctggacatgctgaagttctacacaggttttgagatcagtgaccagact
ggaactgccctgacggagaaagagatgaccactctgcactatgacaaaatcctctctttg
cagagagcagcatttgctcatttccctgagttgcaggactttgctctgtccaacgtggca
gcagtagacactcgtgaatccttgaccaaacactttgggcatctcagtcccaatacgctc
caccgggtggcctcgtatttgtgtctgctgccagagctgcctgaaggacaagacaccacc
tatgagaaggaggttctccttgagcttctggtgtcccgtcatgagcgcagaatctctcag
atcgagcaacttaaccagatgcccctttatccaacagaaaaaataatctgggatgagaac
attgtcccgacagagtactactcaggcgaaggctgtctagcgctacctaagctgaatctc
cagttcctgaccctccatgactacctgttgagaaactttaacctgtttcgtctagagtcc
acctatgagatcagacaggacatagaggatgtggtttggcgtatgaaaccatggcagtcg
gagtacggcggtgtggtgtttgggggctgggccaggatggctcagaccatcacctccttc
tccatagtggaggttgccaagccaaacattggagagagctggccggcccgtgtgcgaggg
gacgtcactgtaaatctgaatgtacaagatcacatcaagcatgagtgggaagggctgcgg
aagcatgacgtctgctttctgatcacggtgcgccccaacctgccctacggcacgcgcttc
gaccggcgccagccctttgtggagcagacgggcctggtgtacgtgagaggctgcgaggtg
cagggcatgctggatgacaaggggcgcgtcattgaagaaggacccgacccgaagcctaag
ctgcgaggagacgccagaaccttccgtgtgtggctggacccaaaccagtatcaacaggat
atgaccagcagcattcagagtggcacagaagacccttacgagtctttcaacgtcatcatg
agacgcaaacccaaggagaacaatttcaaggcagtgctggagaccatcagaaacctgatg
aacaccgagtgtgtggtcccagactggcttcacgacatcatccttggctatggcgaccca
ggcagcgcccactactccaaaatgcctaatcagatctccacgttggatttcaatgacacc
tttctgtccctggaccatttacgatcgtgtttccctgattacaccatcaaggtcaccgag
gacgaccccgagctgcaagtcttcccgttcagaatcaagttcccaatctccaaaaaagct
gaaaaagggaagaaaagaaagactgatgaaccagaggaagaccaaagtgaagacaagacc
ttgatcgttgagccctttgtcacccccaaccgcgggccatatccctacaaccagcccaaa
aggaacacaattcagttcactcctactcagattgaagccattcgggccgggatgcagcca
ggcctcaccatggttgttggaccaccaggtaccggaaagacagatgttgccgttcagatc
atctccaacctctatcacaactttcctgagcagaggaccctgatagtcacacactctaac
caggctttgaaccagctgttcgaaaagatcatggctctagacatcgacgagcgccatctc
ctgcgtcttggccacggagaagaggagctggaaactgagaaggacttcagcagatatggt
cgagtaaactacgtcctagccagacgcctggagctcctcagggaggtggggaggttacag
gagagcttggacgtcccaggagatgtttcatacacctgtgaaacagctggacacttctac
ctctaccaggtgatatctcgctgggaagagtacatgagcaaagtcaggccaaagcagagc
aaggaggtggaggtgcaagctgtggcggcacactttcccttccacaagtacttctccaac
gcccctcagcctgtgttcaagggacgctcatacgaagaggacatggacatctcagagggc
tgctaccgccacatcaagaaaatattcacccagctggaggagttcagggcctttgagctt
ctaagaagtggactggaccgctccaagtatctgctcgtgaaggaagccaaaatcattgcg
atgacctgtacccatgctgcactcaaacgtcatgacctggtggagctgggatttaagtat
gacaatatcctgatggaagaagctgctcagattctggagatcgaaaccttcatccccctc
ctgttacagaacccagaggatggctacagcaggctgaagcgctggatcatgattggagac
caccaccagctgccccctgttatcaagaacatggccttccagaagtactccaacatggag
cagtctctcttcacccggtttgtgcgcctgggagtgcccaccatagatctggatgcacag
ggccgagctcgagcaagcctatgtaacctgtacaactggcgctacaaacagctggggaac
ctgcctcatgtccagcagctgcctgagttccaggtgccaaaccccgggctcaccttcaac
ttccagcttgttaacgtggaggacttcaatggggtgggagaatccgagcccaacccttac
ttctaccagaaccttgcggaggcggagtacagcgtggctttgttcatgtacatgcgtctg
ttgggctaccctgctgaccgcatcagcatcctcaccacctacaacgggcagaaacacctg
atcagagacgtcatcaaccagcgctgcgccggcaaccccttcttcagtcagcctaacaag
gtgacaacagtggacaggttccagggtcagcagaatgactacatcatcctctccctggtc
cgcaccaaagccgtgggacatctcagggatgtgaggcgtctggtggtagccatgtccaga
gccaggctgggtctgtacatcttcgcccgggtgtcgttgttccagaactgcttcgagctg
actcctgtcttcaaccagctcaccgcccgacccatgcagctgcacatccgaccgcacgag
tactacagccaggaacagcccagagatgcttctggacagaaagaccaaatcatcaagaac
atgccagagatgaccaacatggtgtataacatgtacatgcacatgatccagacctcccag
aagcacagacagcagcaacagcagcaactggctctgcctccacaacaaaccaagcctgat
gctgtggctgaggaagcgtcagttagcgccgaagaaaaaccagaagaagaaacccccatg
gagcaggaaacccaagaaggagagacaaacccagagccaaacccacaaggagagacaaac
ccagagccaaagccagaaggagaggcaaccccagaggacaccagtgaggagaaggaggag
gagaaggaggaacagcaagaagcagcgagccatgctaagatgccagagcatcccggcaga
gacagcgacagtgacgaagaggaaaatgaagaggagcaaaagcagtag
DBGET
integrated database retrieval system
