Trematomus bernacchii (emerald rockcod): 117478570
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Entry
117478570 CDS
T09643
Symbol
usp11
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 11
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117478570 (usp11)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117478570 (usp11)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117478570 (usp11)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117478570 (usp11)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117478570 (usp11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
DUSP
Ubiquitin_3
UCH_1
USP7_C2
zf-MIZ
RNA_pol_Rpb5_N
Motif
Other DBs
NCBI-GeneID:
117478570
NCBI-ProteinID:
XP_033981464
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MTANSRCSAAEXPGLDTQRREIESLLREWELRAGDSWYVVERRWYEQWKEFVETGDQNSS
SFPGQIDNTELFEDLDSYHLKERLVENEDFMLVPAEAWHKLLAWYGMLEGQPPLERKVVD
LPSTLKVEVYPVEIFLCLHSNMENVITAQFSRTDSIHSIQRAMCEAFSVPPGSECRLWMK
SSDSTCERLRNVHVSVLDACLSSAMTVIMETRNADGTWPSSRPQIMRNSVEEQDSYRGQP
GVCGLTNLGNTCFMNSALQCLSNTPPLTEYFLQSSYLEELNFTNPLGMKGEIAEAYADVI
KQMWSGRHYSVVPRVFKTKVGHFASQFLGYQQHDSQELLSFLADGLHEDLNRVKNKEYIE
LRDAEGRPDQEVAEEAWRNHRRRNDSVIVDTFHGLFKSTLVCPECHKVSVTFDPFCYLSV
PLPVSKERVMEVFFVSLDPYAKPAQHRVVVPKTGKVSDLCTALSRDTSVPPTQMVVADVF
NHRFYKIYNTDESLSCILDRDDIFVYELSELEEHQEEQVLLALYLRERSHYRDYGSGSSS
YGTSLFGHPLLLSVPRGCCSREELYTLFLQRLARYVRPPDPSEELEEEEEEELYKTQTNG
ISDEEEQDDGEKAGPSQTRTSEPSSGDAPANSQSDDTTTTTEPRPLANHTQPPPAQGDSE
TNGPPDQSEPGCSSETNTPPPTEGEKPCEEESKTSDSSSEPPAQQPCETTEEEKEEDKQE
EACSPSPPANEQPGKRKACCKRRKSLFTIQAVNSNGTTERGMGEGGSAVSFSSQPYVAID
WDPEMKKRFYNENEAEKYVKHGSMEVPQQQTTVQLQECIELFTTMETLEEENPWYCPVCK
KHQLATKKLDLWFLPEVLIIHLKRFSYTKFTREKLDSIVDFPLRELDFSGCLLRKSQSNG
EPPSRYDLIAVSNHYGGLRDGHYTSYARNKDNGQWYYFDDSKVTYAREDQIVTNAAYVLF
YQRQDKIRKPTLPAPNTSPASSSQPANDITSCKDDDITPCKEDDAELGAAAAAASSSSYV
TMETD
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaacagccgctgttccgccgcagagnccccgggcctggacacccagcggcgg
gagatcgagtctcttctgcgggagtgggagctccgcgctggggacagttggtacgtggtg
gagcgtcgctggtatgaacagtggaaggagtttgtggagaccggagaccagaactcgtca
tctttccccggtcagatcgacaacactgagctgtttgaggacctggactcgtaccacctg
aaggagcgcctggtggagaacgaggacttcatgttggtgccggctgaggcctggcacaag
ctgctcgcctggtatggcatgctggaggggcagccgccgctggagcgcaaggtggtggac
ctgcccagcaccctgaaggtggaggtgtaccccgttgagatattcctctgtctccatagc
aacatggagaacgtcatcaccgcccagttcagccgcacggacagcatacactcgatccag
agggcgatgtgtgaggcgttctcggtgcctccgggctcagagtgccgtctgtggatgaag
agttcggacagcacctgcgagcgcctcaggaacgttcacgtgagcgtgctggatgcctgt
ctgagctccgccatgacggtgattatggagacgagaaatgccgatggcacctggccgagc
tccaggcctcaaatcatgaggaactcggtggaggagcaggactcgtaccgaggacagccg
ggggtctgcgggctcaccaacctgggcaacacctgcttcatgaactctgcactccagtgt
ctgagcaacaccccccctctgacggagtacttcctgcagagctcctacctggaggagctg
aacttcaccaaccctctgggcatgaagggagagatcgccgaggcctacgccgacgtcatc
aaacagatgtggtccggccgccactactccgtggtgccgcgcgtcttcaagacgaaggtg
ggccactttgcgtctcagttcctggggtaccagcagcacgacagccaggagctgctgtcc
ttcctggcggacggtctgcacgaggacctgaaccgggtcaaaaacaaagagtacatcgag
ctccgagacgccgagggacgaccggaccaggaagtggcggaggaggcgtggcgtaaccac
cgccggcggaacgactcggtgatcgtcgacacgtttcacggcctcttcaagtccacgctc
gtctgtccagagtgccacaaagtctccgtgacctttgaccccttctgctacctgagcgtc
ccacttcctgtcagcaaggagcgcgtcatggaggtcttcttcgtctctctggacccctac
gccaaacctgcacagcatcgtgttgtggttcctaagacaggaaaagtgtctgacctctgc
actgccctgtcccgagataccagcgtacctcctacacagatggtggtcgctgatgtgttc
aaccaccgtttctacaagatctacaacaccgatgagtctctgagctgcattctggaccga
gacgacatctttgtgtacgagctgagcgagctggaggagcaccaggaggagcaggtgttg
ctggcgctctacctgagggagcgctctcactacagagactacggctccggcagcagctcg
tacggcacctcgctgttcggacacccgctgctgctcagcgtgccgagaggctgctgcagc
cgagaggagctctacactctgttcctacagaggctggcgcgttatgtgcgtcctcctgat
ccctctgaggagttggaggaagaggaggaagaggagctgtacaagactcagaccaatggg
atcagtgacgaggaggagcaggatgacggagagaaagccggaccctctcagacccgaacc
tcagaacccagctctggtgatgcaccggcaaacagccaatcagacgacaccaccaccacc
accgagccccgcccccttgccaaccacacgcagccccccccggcccagggcgactcggag
actaacggacccccggaccagagtgagcccggctgcagctctgagactaacacccccccc
cccactgagggagagaaaccctgcgaggaagagagcaagacctccgacagcagctcagag
cctccagcccagcagccatgtgagaccacagaagaagaaaaagaggaagacaagcaggag
gaggcgtgttctcccagccctccagccaatgagcagccagggaagaggaaggcgtgctgt
aagaggaggaagagtctgttcaccatccaggcggtcaactccaacgggacgaccgagaga
gggatgggagagggggggagcgccgtgtccttcagctctcagccctacgtggccatcgac
tgggaccctgagatgaagaagagattctacaacgaaaacgaggccgagaagtacgtgaaa
cacggcagtatggaggttcctcagcagcagaccactgtccagctgcaggagtgcatcgag
ctgttcaccaccatggaaacactggaggaggagaacccatggtactgtccggtgtgtaag
aagcaccagctggccacgaagaagctggacctctggttcctgcccgaggttctcatcatc
cacctgaagaggttctcctacaccaagttcaccagagagaagctggacagcatcgtggac
ttccccctgagagagctggacttctccggctgcctcctgaggaagagtcagtccaatggg
gagcctccgagccgctacgacctcatcgctgtgtccaatcactacggaggactcagagac
ggccattacaccagctacgcgcggaacaaagacaacggtcagtggtattactttgacgac
agcaaggtgacgtacgccagagaggatcaaatcgtgaccaacgctgcttacgtcttgttc
taccagcggcaagacaagatcagaaaacccactctgcccgcccccaacacaagccccgcc
tcctccagccagcccgccaacgacatcacttcctgtaaggacgatgacatcactccctgt
aaggaagacgacgcagagctcggcgccgccgctgccgccgcctcctcctcctcctacgtc
accatggaaacagactaa
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integrated database retrieval system
