Trematomus bernacchii (emerald rockcod): 117478586
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Entry
117478586 CDS
T09643
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1-like
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117478586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117478586
Membrane trafficking [BR:
tben04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117478586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
PH
RHG20_PH
CDC45
Nop14
Motif
Other DBs
NCBI-GeneID:
117478586
NCBI-ProteinID:
XP_033981483
LinkDB
All DBs
Position
Unknown
AA seq
1665 aa
AA seq
DB search
MDANQGPGQGSPESPNRAVEYLLELNNIIESQQKLLETQRRRIEELEVQLDRLSQENKDL
RLDRQPVVPPPPAPPPEPPLPPPPPPPPPTTSTSMSAKNHQQHHHHHHNSQYQAPPQPPS
SIPLHQNHHHHQYHHNHHHSSAHHSYNSSNSIPTTAIPVPAPSSAPTSISIPTQIPTPIS
PPAPAPAPAPPPPPPMPSRDQPRAHSRLTRLPSTSTGTNTNFVEKERERIERMHKTNASN
NHHAHTLHHQKSVEGDSQCPEALTFSDSSFGHPPPFHRYSNSPLSSPCDPYGSTGGPLGA
CHTQGSSPVSPPSPASLAWAQHSRHQPASLALRKQEEEESKRCKALSDSYELSTDLQDKQ
VEMLERKYGGQFVSRRAARTIQTAFRQYRMNKNFERLRSSASESRMTRRIILSNMRMQYS
FDERQPQGQGSAGQRGPDDAGDIDDSFSKQVKSLADSMDDSLTCQSGREDSQEAGGEGEE
DEEEDEEEVDEEEEEEEEEEGEEDEEEDEEDDYRECAWRNSSASSPTSGVGAGHRQPSNG
GAGRRRRRRRSGGAGGQQGDGGRQQEGQHPVRARLHRAPGVRTGAVGSGPRRRERERERM
GGDGEGESGEEEPQGGEGGGSSEADSPQGTIKHKPNGRSVPTAQGQTRSPASAPLPMPSA
RALPPHPLPHPLPHPLHPHPHPHPSPIPHLPTILHHHPQYSQPHVMHMHHVPGPYIQQHH
FAQQHYHHLHHQHHHGYPEPPSSPLPSPVPPLSPLPPPLTPSPLSSSMEAQQHHHPQLHH
HHLLCSDGDNESVNSTTTNSNDDTTVNNCSSGSSSRDSLREPMGGGAAGKQTYQRESRHS
WDSPAFNNDVVQRRQYRIGLNLFNKKPEKGTQYLIERGFVSDTPIGIARFILERKGLSRQ
MIGEFLGSRQQFNKDVLDCVLDEMDFSGMDLDDALRKFQAQIKVQGEAQRVERLVEAFSQ
RYCVCNPVLIRNFQNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDNGQ
DIPRDLLVGIYGRIQKWELRTNDDHVSQVQAVERMVVGKKPVLSLSHRRLVCCCQLFEVP
DPNRGQRSGVHQREVFLFNDLLMVTKIFQKKKTSVTYNFRQSFPLVDMQVHTFQNTYYPH
GIRLTSANPGGERKVLIVFTAPSQQDRARFTSDLRESIAEVQDMEKYRVESELEKQKGVM
RPGVMAGGGPGGGGAPGGGPIGGMKGEAVNGILGRPSLDDTYASVDGLKRTALSSSLRDL
SETGKRGRRNSVGSLDSTIEGSIISSPRPHQQRPLLAGGLPYSMMAPSSPAAYRPHRPTQ
SPGTGVGGGPGLCHNPGGISTSPLVSGGGAGGGGGMGGVGGPSGGGGLLGNFFGSRRGKV
PIPLTMTSPPPQGPPSPLMISSPPHYPAPAPPIAHPASPSPCPSPLPNLAQSDSGGVGGL
GPSKLQALHAQYCHGNSGGGGVSGIQQQQTPPPPYHHHHRFSAPPRRQGPPPSHPPQHQR
LQHGGGQHPRYNLGFITPPPLSPHSPLTPTTPHGLYHSGRPGVGGGGKLPLTISHSQPHP
HAHTHSHNHAVLTHSPLSPSPSASPSTHFIFSTPPPQTPSARLVSQTPPQPYGPQYQQLS
SIPPPPPHSPLPPPPNTPLSLHQGAGGGQGGGSKSKPVSRISTVV
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggatgctaatcaaggcccaggccagggcagcccagagagccctaaccgggcggtggag
taccttcttgaactcaacaacatcatcgagagccagcagaagcttctggaaactcagagg
cgccggatcgaggagctggaagtccagctggaccggctcagccaggagaacaaagacctg
cgtttggaccggcagcccgtcgttcctcctccacccgctcctcctcccgagcctccactc
cctcctccccctccaccgcctccaccgaccacatccacttccatgtctgccaagaatcac
caacagcaccaccaccaccaccacaacagccaataccaagctcctccgcagcccccctcc
tccatccccctgcaccagaaccaccaccaccaccagtaccatcacaaccaccaccactcc
tccgcccaccactcttacaacagctccaacagcatccctacgacggcgatcccggttccc
gctccgtcttcagccccgacctccatctcgatccctacccaaatcccgactccgatatcc
cccccggctccggctccagctccggctcctcctccgccgcctccgatgccgtctcgggac
cagccgcgggcccacagccggctgacccgcctgccctccaccagcaccggcaccaacacc
aactttgtggagaaagagagggagaggattgagcgcatgcacaaaaccaacgcctccaac
aaccaccacgcccacaccctccaccaccagaaatctgtggagggcgactctcagtgtccg
gaggcgctcactttttctgattcgtccttcggccacccgcctcccttccatcgatacagt
aacagtcctctctccagcccttgtgacccctacggctccaccggcgggcccctgggagcc
tgccacacacagggaagctctcccgtctctccccccagcccggcgagccttgcctgggct
cagcacagccgacaccagccggccagcctggcgctccgcaagcaagaggaggaggagagc
aaacgctgcaaggctctatccgacagctatgagctctctacagacctccaggacaagcag
gtggagatgctggagaggaagtacgggggtcagttcgtgtcgcggcgggcggcgcggacg
atccagacggcgttcaggcagtaccgcatgaacaaaaactttgagaggctccgcagctcg
gcctcggagagcaggatgacccgccgcatcatcctgtccaacatgaggatgcagtactcg
tttgatgagcgtcagccgcagggtcaggggtcagcgggtcagcgggggccagacgacgca
ggagacatcgacgactccttctccaaacaggtgaagtctctggccgactccatggacgac
tccctcacctgccagtccggacgagaagactcccaggaggcgggaggagagggggaggaa
gacgaggaggaggacgaagaggaggtggatgaagaagaagaagaggaggaggaggaggaa
ggggaggaggacgaggaggaagacgaggaagacgattacagagagtgcgcctggcgtaac
tccagcgcttcgtccccgacgagtggtgtgggggccggccaccgacaaccgagtaatggg
ggagcagggaggaggaggaggaggaggaggagcgggggggcgggaggacagcagggagac
ggagggaggcagcaggaggggcagcaccccgtcagagcgaggctccatcgggcgcctggt
gtacgaacaggagccgtcgggagtggaccgaggcgccgggagagggagagggagaggatg
ggaggagacggggaaggagagagcggggaggaggagccgcaagggggagaagggggaggc
agcagcgaggccgactcccctcagggaaccatcaaacacaagcccaacggccgctccgtc
cccacggcgcagggtcagacccgcagcccggccagcgctcccttaccgatgccttcagcc
cgcgccctccccccccacccgctcccccacccgctcccccaccctctgcacccccaccct
cacccccacccctcacccatcccccacctgcccaccatcctgcaccaccacccgcagtac
agccagccgcacgtcatgcacatgcatcacgtgcccggcccctacatccagcagcaccac
ttcgcccagcagcactaccaccacctgcaccaccagcaccaccacggttacccagaaccc
ccctcttccccgctgccctcccccgtgcccccactctcccctcttcctcccccgctcacg
ccctctccgctctcctcttccatggaggcccagcagcaccaccacccccaactgcaccac
caccacctgctgtgctctgatggagacaacgagagcgtgaactccaccaccaccaactcc
aacgacgacaccaccgtcaacaactgcagctccggctcctcgtcgcgcgacagcctgcgg
gagccaatgggaggaggcgctgcggggaagcagacctatcagagggagagccggcacagc
tgggactcgcccgccttcaacaacgacgtcgtgcagcggagacaataccgcatcggactc
aacctgttcaacaagaagccggagaaggggacccagtacctgatcgagaggggcttcgtg
tcggacactccgatcggcatcgcccggttcatcctggagaggaagggtctgagccggcag
atgatcggagagttcttgggcagccggcagcagttcaacaaggacgtcctggactgtgtc
ctggatgagatggatttctctgggatggatctggacgacgctctgaggaagtttcaggct
cagattaaagttcagggcgaagctcagcgggtggagcggctggtggaggccttcagtcag
cggtactgtgtttgcaacccggtgctgatccggaatttccagaacccggacaccatcttc
atcctcgctttcgccatcatcctcctcaacaccgacatgtacagccccaacgtgaagccg
gagaggaagatgaagctggaggacttcgtcaaaaacctgcgaggcgttgataacggtcag
gacatccccagagatctgctggtggggatctacggacggatccagaaatgggagctgagg
acaaacgacgaccacgtgtctcaggtccaggcggtggagaggatggtggtcgggaagaag
ccggtgttgtcgctgtcccatcgcaggttggtctgctgctgtcagctgttcgaggttcct
gatccgaaccgaggtcagaggagcggcgtccatcagagagaagtcttcctgttcaacgac
ctgctgatggtgacgaagatcttccagaagaagaagacttcagtgacgtacaatttcaga
caatcatttcctctggtggacatgcaggtccacaccttccaaaacacctattaccctcat
ggcatcagactgacgtcggcgaaccccggcggagagaggaaggttctgatcgtcttcaca
gcgccgagtcagcaggaccgagctcgattcacctctgacctccgagagagcatcgctgag
gtgcaggacatggagaagtaccgcgtggagtccgagctggagaagcagaaaggagtgatg
cgtcccggagtgatggcggggggaggaccgggaggcgggggggcgccgggaggggggcct
ataggcggcatgaagggcgaggcggtgaacggcattctgggtagaccgagcctcgacgac
acgtacgcctcggtggacggactcaaacgcaccgcgctcagctcctctctgagagacctc
tcagaaacagggaagcgaggtcgtaggaacagtgtcgggtcattggacagtaccattgaa
ggttccattattagcagcccccggccccaccagcagcgccccctgctggccggaggtctc
ccctacagcatgatggccccctcgtctccagcagcttaccggccacaccgcccaactcag
agccccggtacaggggtggggggtgggccggggctctgtcacaacccgggggggatcagc
acctcgcctctcgtgagcgggggaggggctgggggaggaggcgggatggggggggtggga
ggcccgagtggcggcggcggcctgctggggaacttctttgggagcaggagaggcaaagtt
cccattcccttgacgatgacgtcgcctcctcctcagggtcctcccagtcctctgatgatc
tcctcccccccccactaccctgcccccgccccccccatcgcccacccggcctccccttcc
ccgtgcccctccccattgcccaacctcgctcagtcggactcgggaggggttggaggcctc
gggccgtccaagctgcaggcgctgcacgcccagtattgccacggcaacagtggaggaggc
ggagtcagtgggatccagcagcagcagactccgccccctccctaccaccaccaccaccgg
ttctccgccccgccccgccggcagggtccccccccttctcaccccccgcagcaccagcgg
ctgcagcatggcggcggacagcacccccgttacaacctgggcttcatcacccccccgccg
ctctcccctcactcccccctaacccctactaccccgcacggactctaccactcggggagg
ccgggggtcggcggtggaggcaaactcccgctgaccatctcccactcgcagcctcacccc
cacgcgcacacacactctcacaaccatgccgtgctcacacactcccctctaagcccctcc
ccttccgcctccccctccacccatttcatcttctccacgcctcctccgcagacgccctcg
gcacgcctcgtcagccagacgcccccgcagccctatggaccccaatatcagcagctgtcg
tccatcccgcctcctcctccgcactcgcccttacctccgccgcccaacaccccgctctcc
ctgcaccagggggctgggggagggcaggggggagggtccaaatccaaaccggtcagccgg
atcagcacggttgtgtga
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