Trematomus bernacchii (emerald rockcod): 117478778
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Entry
117478778 CDS
T09643
Symbol
skp2
Name
(RefSeq) LOW QUALITY PROTEIN: S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04068
FoxO signaling pathway
tben04110
Cell cycle
tben04120
Ubiquitin mediated proteolysis
tben04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117478778 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
117478778 (skp2)
04150 mTOR signaling pathway
117478778 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117478778 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117478778 (skp2)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117478778 (skp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_NXF1-5
LRR_R13L1-DRL21
LRR_At5g56370
LRR_9
LRR_4
Motif
Other DBs
NCBI-GeneID:
117478778
NCBI-ProteinID:
XP_033981571
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MLSQSNEMNKRKSSDVFLSEGLDMECTPTESIMQFSPPHKYQRLLSMRKENDCNQFVLNK
RSRRKKESTSCISWDHLPDELLLRILFYVPLQDLCRMSSVCKRWHRLALDESLWHSVDLE
GLTHVGPALQQVLKNGVHMLRCPRSFVEDFHFSGSGPLQMVLMDLSSSIIPPSSLESILS
HCRLLEFLSLEALQLSDNIISSLSMNPNLLQLNLSGCSGFSAPALAHMLKSCSRIEQLNI
SWCEFDNDHVKSVVNNLNPAVTHLNLSGYREGLTLEDVKVLVTRCPNIQALDLSDSTLLM
ADSFPVLRQLKGLLHLSLSRCYHIHLAALTNLGSVFPLLSLLDVFGIVKDGHLSSLKKEL
PRITINSRPFSSIARPSPSSGLTGGFMWDRKCQLRFKL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctcagtccaacgagatgaacaaacgcaagtcctcagacgtctttctgagcgag
ggtctggacatggagtgcacccccacagagtccatcatgcagttttcccccccacacaaa
taccagaggctcctcagcatgaggaaagagaacgactgcaaccagtttgtcctcaacaag
agatcacggaggaaaaaggagtccacgtcatgcatctcatgggaccaccttcctgacgag
ctgctcctcaggatcctcttctacgtccctctgcaggatctctgcaggatgtcgtccgtc
tgcaagcgctggcatcgcttagcgttggatgagtctctgtggcacagcgtggatctggag
ggtttgacccacgtaggtccggctctgcagcaggttctgaagaacggggtccacatgctg
cgctgccctcgctcctttgtggaggacttccacttcagcggctcaggccccctacagatg
gtcctgatggatctgtccagctccatcatccccccctcctctctggagagcatcctctct
cactgcagactgctggagttcctgagtctggaggctctgcagctttcagacaacatcatc
agctctctgtccatgaaccctaacctgctgcagctgaatctgagcggctgctccggcttc
tctgctcctgctctcgctcacatgctgaagtcctgcagcaggatcgagcagctgaacata
tcgtggtgtgaattcgacaacgatcacgtgaagagtgttgttaataatctgaaccctgct
gtcactcacctgaacctcagcgggtacagagagggcctcacactggaagatgtgaaggtg
ctggtgaccaggtgtccaaatattcaagcactagatttaagtgacagcactctcctgatg
gccgacagcttcccggtcctcagacagctgaagggtttgctccatctctctctgagccgc
tgctaccacatccacctcgctgccctcacgaacctgggctccgtgttccctcttctctct
ctgctggacgtgtttggcatcgtgaaagacggccacctgtcctctctgaagaaggagctt
cctcgcatcaccatcaactccagaccgttctccagcatcgcccgcccctcgccctcctca
ggcctcaccggcggcttcatgtgggacaggaagtgccagctgaggttcaaactgtag
DBGET
integrated database retrieval system
