Trematomus bernacchii (emerald rockcod): 117478886
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Entry
117478886 CDS
T09643
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tben01100
Metabolic pathways
Module
tben_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117478886
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tben01003
]
117478886
Enzymes [BR:
tben01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
117478886
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
117478886
Glycosyltransferases [BR:
tben01003
]
Glycan extension
O-Glycan
117478886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
117478886
NCBI-ProteinID:
XP_033981711
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MLHATMLRRGLLSWVSRVGGVLVLLCCSLSLLYVMTCSPPLSVDPPLSLALPRSGPNHAS
LGPGTGRGGGGGNAQSGGPPGSYQVLLQEREEQHRLHISSLKKQISQLKEALQESSQQLK
GVQESLKRASGGPSEGQEAGAGSQGGFLGENQGAKSQQADLQDFLRSQAAKAEVSVGVRL
PSEYAVLPFESFTLQKVYQLEMGLTRHPEEKPVRRDKREALGEVLETALHSLNTPTGEKE
RTSKVYTPSDFLEGITRTEKDKGTLYELTFRGEAAQEFRRLVFFRPFGPLMKVSNEQVDT
SNVPINIIVPLSKRTDKFKHFMTNFREVCVRQDGRVHLTVVYFGTEQMSEVRSTLENTSR
EANFKNFTLLQLDEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTADFLNSCRLNTQPG
KKVFYPVLFSQYNPTLIYGSPEHIPPVEQQLAIKKDTGFWRDFGFGMTCQYRSDFINIGG
FDIDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLWHEKHCADELPPDQYRMCMQSKA
MNEASHGQLGMLFFRQEIEAHLRKQKNPKKT
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgctacatgctaccatgctgcgccgcggcctcctctcctgggtctcccgtgttggaggc
gtgttggtgttgctctgctgctcactttcgctgctttacgtgatgacatgcagccctcct
ctctccgtggaccccccgctgagcctcgctctccctcgatctggaccaaatcacgcctcc
ttgggtccggggacgggaagaggaggagggggaggaaatgctcaaagcggagggcctcca
ggatcctatcaggtgcttcttcaggagcgagaggagcagcaccgcctccacatctcctcc
ctgaagaagcagatctctcagctgaaggaggcgcttcaggagagcagccaacagctgaag
ggagtgcaggagagcctgaagagggcgtccgggggtccctcggagggccaggaagccgga
gctggatctcagggaggttttctgggggagaatcagggagcaaagagccagcaggcggat
ctgcaggacttcctgaggagccaggcggcgaaagcggaggtgagcgtgggcgtccggctt
cccagcgaatacgccgtgctgccgtttgagagcttcaccctgcagaaggtctaccagctg
gagatggggctcaccaggcaccccgaggagaaaccagtgaggagagacaagagggaggcg
ctgggggaggttctggagacggccctgcacagcctcaacacccccactggggagaaagag
agaaccagcaaggtgtacacgccgtccgacttcctagaaggtataactcgtacggagaag
gacaaaggcacgctgtacgagctgaccttcagaggagaagccgctcaggagttcagacgc
ctcgtcttcttcagacccttcggcccgctgatgaaggtcagcaacgagcaggtggacaca
tcgaacgtccccatcaacatcatcgtgccgctgtccaaacgcaccgacaagttcaaacac
ttcatgaccaacttcagggaagtgtgtgtgcgtcaggacggccgtgtccatctgaccgtt
gtgtattttgggacggagcagatgagtgaggtccgcagcacgctggagaacacgtccagg
gaggcgaactttaagaacttcaccctcctgcagctggacgaggagttttctcgcggacgg
ggcctagacgtcggggctcgagcctggaaaggaggaaacgttctgctcttcttctgcgac
gtcgacatctacttcaccgccgacttcctgaactcctgcagactcaacacgcagcctggt
aaaaaggttttctacccggtgttattcagccagtacaacccaactctgatctacggaagc
cctgaacacatccctcctgtggagcagcagctggcgataaagaaagacaccggcttctgg
agggattttggattcgggatgacttgccagtacagatccgacttcatcaacatcggcggt
tttgacatcgacatcaaaggctgggggggtgaagacgtgcacctgtacaggaagtacctg
cacagtaaccttctggtggttcgagccccgtcccgagggcttttccacctgtggcacgag
aaacactgcgccgacgaactgccgccggatcaatatcgcatgtgcatgcaatccaaagcc
atgaacgaggcgtcgcacggccaattggggatgctcttcttcaggcaggagatcgaagcg
cacctccgtaaacagaaaaaccccaaaaagacatga
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