Trematomus bernacchii (emerald rockcod): 117478922
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Entry
117478922 CDS
T09643
Symbol
sptlc1
Name
(RefSeq) serine palmitoyltransferase 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00600
Sphingolipid metabolism
tben01100
Metabolic pathways
tben04382
Cornified envelope formation
Module
tben_M00094
Ceramide biosynthesis
tben_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117478922 (sptlc1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117478922 (sptlc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tben01007
]
117478922 (sptlc1)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
117478922 (sptlc1)
Amino acid related enzymes [BR:
tben01007
]
Aminotransferase (transaminase)
Class II
117478922 (sptlc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
PAD
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
117478922
NCBI-ProteinID:
XP_033981776
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MASGQQWVLVEMVQAFYEAPAYHLILEGILILWIIRLLFSKTYKLHDTFKLTEKEKEDLI
EEWQPEPLVPLVSKDHPSLNYDVVTGPPTHKIIINGKECINFASFNFLGLLDNERVKQKA
LASLKKYGVGTCGPRGFYGTFDIVHLELESRLANFMKTEEAIIYSYGFATIASAIPAYSK
RGDSSFLDEAACFSIQKGLQASRSFIKYFKHNDMEDLERMLKEQELEDHKNPRKARVTRK
FIVVEGLYINTADICPLPQLVKMKYRYKVRIFLEESMSFGVLGENGRGVTEHFGVNIDDI
DLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPMLAAAAIEALNIMEEDP
DIFTVLREKCKHVYKALQGTPGLKIVGVPCAPALHLQLERSSGSRESDMRLLRSIVEYCM
DRGVALTLARYLEKEERFLPSPSLRVVVTIEHTEEDIQKAVSCVQEAASSLLK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggacagcagtgggtgttggtggaaatggtgcaagcgttttatgaggctcct
gcgtaccacctgatcctggaggggatcctcattttgtggatcatcagacttctcttctct
aagacctacaagctccatgacacctttaaactgacagagaaggagaaggaggatctgatt
gaggagtggcagccagagcctcttgttcctcttgtttccaaagaccacccctccctcaat
tatgatgttgtcacaggtcctcccacccacaaaatcataatcaacggaaaggagtgcatc
aactttgcatcgtttaacttcctgggtctcctggacaatgagcgggttaagcaaaaagct
ctggcatctctgaagaagtacggtgtgggcacctgtgggccaagaggcttctatgggact
tttgacattgttcacctggagctggagagtcgtctggccaacttcatgaaaactgaagaa
gccatcatttactcctatggctttgcaaccattgccagtgccatccctgcctactccaag
aggggcgactcatctttcttggatgaagccgcctgcttctccatccagaagggtcttcag
gcgtcccgcagcttcatcaaatacttcaaacacaacgacatggaggatctggagcggatg
ctgaaggagcaggagttggaggaccataagaatcctcgtaaagctcgagtgacccggaag
ttcattgtggtggagggtctgtacatcaacactgcagacatctgtccccttcctcagctg
gtgaagatgaagtacaggtacaaggtgcggatctttctggaggagagcatgtcgtttggt
gtgttgggggagaacggccgaggagtcactgaacactttggagtcaatattgatgacatt
gacctcatcagcgccaacatggagaacgctctggcttctatcggaggattctgctgcgga
cgctcctttgtcatcgaccaccagcgtctctcgggtcagggctactgtttctccgcctcg
ctgccccccatgctggctgctgccgccatcgaggccctgaacatcatggaggaggaccca
gatatcttcactgtcctgagggaaaagtgcaaacacgtttacaaggctctacagggaact
ccaggtctgaagatagttggagtcccgtgtgctccggctctccacctgcagctggagagg
agttcaggctccagagagtcggacatgcggctgctgcgctccatcgtagaatactgtatg
gacagaggcgtggctctgactctcgctcgttacctggaaaaagaggaacgtttcctcccc
tcgcccagcctcagggtggtggtcaccatcgaacacacggaggaggacatccagaaggcc
gtgtcctgcgtccaggaggcagcttcctccctcctcaagtga
DBGET
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