Trematomus bernacchii (emerald rockcod): 117479079
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Entry
117479079 CDS
T09643
Name
(RefSeq) 5'-3' exonuclease PLD4
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00564
Glycerophospholipid metabolism
tben00565
Ether lipid metabolism
tben01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
117479079
00565 Ether lipid metabolism
117479079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117479079
Enzymes [BR:
tben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
117479079
Membrane trafficking [BR:
tben04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
117479079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7436
Motif
Other DBs
NCBI-GeneID:
117479079
NCBI-ProteinID:
XP_033981988
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MTSLYSSLHDSYVPNKRRSTSCVALAVILGCLTVLGVLLAIAVLERPNPPKDHETLPQGA
GGSVLSTDQCSMALVESIPQHMKYKANATLGIPLEQVWKDLISMATAQVDISSFYWTLTG
EDINVHSSSDTAGRDILKALEELPSRNVSVRVLTSVPTVRTNSTDLEILKQKGVQVRRVN
FGRLTGGVLHSKLWIVDRKHVFIGSANMDWRALTQVKELGVVVYNCSSLANDLHKIFKSY
WEMGQSHSSVPQPWPAEYDTAFNKQHPLLVKSDNISSRLYLTGSPPSFCPPSRTQDLEAI
LSIISEAQHYMDVAVMEYFPTRRFERPQRYWPIIDDAIRTAAFERRVKIRMLISCGRDSD
PAMLPFLQSLASMDSPHHNISLQLKLYIVPVGNQSDIPYTRVNHNKYMVTDKVAYIGTSN
WSGDYYLTTAGVGLVISQHAPHHVWKTKALQFQLKSVFERDWHSEFAVHLADLGNHPECA
LSRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacctctttgtacagcagccttcatgacagctatgttccaaacaaaaggaggtcgacc
agctgtgtggcattagctgtgattctgggctgtctgaccgtcttgggggtcctgctggcc
atcgctgtgctggaaagaccaaacccccccaaagaccatgagacacttcctcagggagct
ggtgggagtgttttatctacagaccagtgcagcatggccctggtggagagcatccctcag
cacatgaagtacaaagccaatgctacgcttggcatccctctggaacaagtatggaaagat
cttatctccatggcaacggcccaagtggacatatcctctttctactggactctaactggg
gaagacattaacgttcactcttcctctgacacagctggaagagacatcctgaaagcactg
gaagagttgccctccaggaacgtatctgtccgagtgctgaccagtgttcccactgttaga
acaaactccacagatttagagatcttaaaacagaaaggagttcaggtgaggagggtgaac
tttgggcgcctcacggggggcgtcctccacagcaagctctggattgttgacagaaaacac
gtgtttattggaagtgccaacatggactggagggccctcacacaggtgaaggaactgggg
gtggtcgtctataactgctccagtctagcaaacgacctccataaaatcttcaagtcctac
tgggagatgggacagtcccacagctctgtgccacagccctggcctgcagagtatgacact
gccttcaacaaacagcaccccctactggtgaaaagtgataatatctccagcaggctgtac
ctcacaggctctccaccatccttctgccctccttcgaggactcaggacctggaggctatt
ctgtccatcatctcagaggcccaacactatatggacgtagccgtcatggagtatttcccc
accagacgatttgaaaggcctcagagatactggcctatcattgatgatgccatcagaacg
gctgcatttgagaggagggttaagatccggatgctgatcagctgtgggcgggactctgac
ccagccatgctgccattcctccagtctctggcctccatggacagccctcaccacaatatc
agcctccaattgaaactgtacattgtgcctgtgggaaaccagtctgatattccatacacc
agagtcaaccacaataaatacatggtgactgataaagtagcctatattggcacctccaat
tggtcaggggactactatctgaccacagctggagtgggtctggtgatttcccagcatgct
cctcaccatgtatggaagaccaaggccctgcagttccagctgaagtcggtctttgaaaga
gactggcactctgagtttgctgtgcacctcgcagacctgggcaaccacccagagtgtgca
ctatcaagaccataa
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integrated database retrieval system
