Trematomus bernacchii (emerald rockcod): 117479216
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Entry
117479216 CDS
T09643
Symbol
arhgef1a
Name
(RefSeq) rho guanine nucleotide exchange factor 1a isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117479216 (arhgef1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117479216 (arhgef1a)
Membrane trafficking [BR:
tben04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117479216 (arhgef1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
SOS1_NGEF_PH
BRISC_FAM175B_helical
Prok-RING_1
PHD
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
117479216
NCBI-ProteinID:
XP_033982127
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MSRVTNLSKLRQERVKEINLRNKERERMREREKAAREREARYSNGHLFTSLTVSGNTLCS
ACNKSITAKEALSCPTCNVTIHNRCRDALPNCAKMKQRQQKTALMRNSSALQTVTLRTKA
PGMRERPTSAIYPSESFRQTLLGSRRGRSGLSLSKSVSTNNIAGTLSEDSTLGLRRILSQ
STDSLSFRNRAMSIESLNDDGDNYYSSVLEELELEGQDFKADSWSMAVDSSYLQTHRKNI
IKRQDVIYELIQTELHHMRTLHIMERVFRQGMLDELQMDLCTVHAMFPCLDQLIRIHSHF
LAQLLLRHNCSLQPGSYRNYTIHQLGDILLEQFSGQCADDMRKTYAEFCSRHMKAVKLYK
ELLARDKKFQSFIRRVSRGSLLRRHGVQECILLVIQRISKYPVLVQRILENTAVNDDEEE
ASSIAQASFMVRELLSAIDQQMEDLEQTQRLQEIQAKLDPRSETRVRDGGLFKPSELFRR
RLVHEGTLFWKTPGSRLKDTTVLLMTDVLVFLQEKDQRYFFPCLDKSSVLSLQNLIVRDI
ANQERGMFLISDSSPPEMYEFHAASKEDKNVWIRHIQRTVSKCPSREDFPLIETEQKAHL
RRLKADIQQKDREMLELLQERVTLFCELAEVTSGHEGLQTHNTRILFRADTPQAPRAEKH
LQDATTEVDRLSELLLGSSVDIPLPGHHSHMEGGDTSAQDLLVNGDHDGFTAKKIYQRLV
NLSVYLHAVQGAVIKQDSILEQLLQPQESPPPAAGGGWRPLWRDGVTREAGAGSSVGELT
LLQRQHSLLQEELLRLRDAEGRFKESEKARARLERQVRNMKDSQPVSLQPHREPPHGAET
LWISRDPASQSEGLQDGSDVEVDMTSDDDDGTVSESSKDLQDIPEEI
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagttaccaacctgtcgaagctgcgacaagagagagtgaaggagatcaacctg
cggaataaagagagagaacgcatgagggagcgagagaaagcagcgagggagagggaggct
cgctacagcaacggtcacctgttcacctctctgactgtgtcagggaacacgctgtgctca
gcatgcaacaagagcataactgccaaggaggcgctcagctgccccacatgcaacgtcact
atccacaatcgctgtcgagacgctttgccaaactgcgccaaaatgaaacagaggcaacag
aagacagccctaatgcggaacagctcagccttgcagactgtcacgctgcgcacaaaagct
ccaggaatgcgcgagcgtcccacctcagccatctacccctcagagagcttcaggcagacc
ctgctggggtcccgccggggtcgctccggcctgtccctgtccaagagtgtgtccaccaac
aatatcgcagggaccctgagtgaggactccaccctggggctgcgcaggatcctgtcccag
tccacagactccctcagcttcaggaacagagctatgtcaatagagtccctgaacgatgac
ggagacaactactatagttcagtattagaagagctggagcttgagggacaggacttcaag
gctgactcctggagcatggccgtggacagcagctacctgcaaacacaccgcaagaacatc
atcaagaggcaggatgtcatctatgagctgattcagacagagctgcaccacatgagaacg
ctgcacatcatggaaagggttttccggcagggcatgctggatgagctccagatggacctg
tgcaccgttcatgccatgttcccctgcctggaccagctgatcaggatacactcccacttc
ctggctcagcttctcctgcggcacaactgcagcctgcagcctggatcataccgcaactac
accatccaccagctgggagacattcttctagagcagttctcaggtcagtgtgcagacgac
atgaggaagacctacgctgagttctgcagccgccacatgaaggctgtcaaactgtacaag
gaactgctggccagagacaagaagttccagagcttcatacggcgggtgagtcgtgggtcc
ttgctgcgtcgccatggtgttcaggagtgcatcttgttggtgattcagcggatctccaaa
tatcctgtccttgttcagcgtattctggaaaatactgcagtgaacgatgatgaagaggaa
gcctcttctatagcccaggctagcttcatggtcagagaacttctaagtgcaatagaccaa
cagatggaggacctggaacaaacacagcgtctgcaagagatccaggccaagctagacccg
cgttctgaaaccagagtgagggatgggggactgttcaagccttcagagctgttccgcagg
agactggtccatgaaggaaccctgttctggaaaaccccaggatcccggctcaaagataca
acggtcttattgatgacagacgtcctggtgtttctgcaggagaaagaccaaagatacttc
ttcccatgtctggacaagtcctcagtgctgtcccttcagaacctgatagtgagggatata
gccaatcaggagcgaggcatgttcctcatcagcgactcctctcctcctgagatgtacgag
ttccacgctgcctccaaagaagataagaacgtctggatccgccacatccagcgcaccgtc
agcaagtgcccatcgagagaggacttccccctcatagagacggaacagaaggcccacctg
aggagactcaaagctgacatccagcagaaggaccgggagatgctggagctcctgcaggag
agggtgactctgttctgtgagctagccgaggtcaccagcggtcatgaggggctgcagacc
cacaacactcgcatcctgttcagggcggacaccccccaagccccccgggcagagaagcac
ctgcaggacgccacaacggaggttgacaggttaagtgagctcctccttggttccagtgtt
gacatccctctacccggccatcacagccacatggaggggggagacaccagtgctcaggat
ctgttggtcaatggagaccatgatggcttcacagcaaagaagatctaccagaggctggtg
aatctgagtgtttatctccatgcagtccagggggcggtcatcaaacaggactccatctta
gagcagctgctgcagccccaggagtctccccccccagcagcagggggggggtggcgcccc
ctctggagggacggggtgacccgggaggccggcgcaggctccagcgtgggggagctgacc
ctcctgcagaggcagcacagcctgctgcaggaggagctgctgaggctgcgggacgccgag
ggccgcttcaaggagagcgagaaggcccgggcccggctggagaggcaggtccggaacatg
aaggactctcaacctgtatctctgcagccacacagggagcccccccacggagccgagacc
ctctggatcagccgggaccctgccagccaatcagagggcctgcaggacggcagtgatgtg
gaagtggacatgacgtctgatgatgacgatgggacggtatctgagagctccaaagatctt
caggacattccagaggagatctga
DBGET
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