Trematomus bernacchii (emerald rockcod): 117479241
Help
Entry
117479241 CDS
T09643
Symbol
vars2
Name
(RefSeq) LOW QUALITY PROTEIN: valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117479241 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tben01007
]
117479241 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tben03016
]
117479241 (vars2)
Enzymes [BR:
tben01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
117479241 (vars2)
Amino acid related enzymes [BR:
tben01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117479241 (vars2)
Transfer RNA biogenesis [BR:
tben03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117479241 (vars2)
Prokaryotic type
117479241 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
HrpB7
Anticodon_3
Motif
Other DBs
NCBI-GeneID:
117479241
NCBI-ProteinID:
XP_033982156
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MAQMWRAGRVLTARLGDRGAARLCSGTLPKPPSSTSSPPLSSRPQAQKRRREREEAILSG
QHSPAEDGVLGWSEKQRIEYTAHTAPGTKKDTSLPLPPSYSPEYVESSWYQWWEKEGFFS
PEQHERLPHAVDQTFSLCIPPPNVTGSLHLGHALTVAVEDALVRWRRMQGHRVLWVPGCD
HAGIATQTVVERRLLRETGRRRQDFTRQEFLREVWKWKNERGEEIYQQLRSLGASLDWSR
ACFTMDPVFSRAVSEAFVRLADSGRIYRSEALVNWSCALESAISDIEVDSKDLSGPTLLC
VPGYDNKVEFGTMLTFAYAIEGHDGEVAVSTTRPETMLGDVAVAVHPEDPRYQAFHGKQC
RHPFTSRLLPIITDPLVDMELGTGAVKVTPAHDHTDFLLSQRHSLPRLTVIGGDGNMTTA
CGQWLQGVKRFDARQMVVDALVERKLFRGKKNHAMTLPVCSRSGDIIEPLLKKQWFISCD
EMAKQAIQAVEDGQLQIVPHYYSKTWRNWLSNISDWCISRQLWWGHQIPAYQVQLPDSTN
TQEERWVWGRSEDEARQRAAVRYGVKPEDITLTQDPDVLDTWFSSGLFPFAMLGWPEQTP
DLQHFYPNSLLETGSDLVFFWVARMVMLGTELTGQLPFKQVLFHSMVRDKHGRKMSKSLG
NVIDPLDVIHGVSLERLQEKVQEGNLEPREHLVSMEAQRKDFPRGIPQCGTDALRFALCS
HKMQGEDISLSISEVLSCRHFCNKMWQTLKFTLGVLGDSSTPVTTLEQTAAVGSMERWVC
SRLYSTVLQCEQGLEASKLHTVTSALHSFWVHSLCDVYMECVKPVLALPPDTEQSVGAQQ
GVRSVLFHCVSVSLALLSPFMPFITEELWQRLQPFSPAAAASPPTLCLQPYPRSSQLAHW
HFPDEERDFLLVQEVIRAARSLRAQCGMTKEKPAMWAVCSPSQAQVLLHFGSAVWTLCRI
SSLHIHCPDGAECPPALLSTPPPTGSLVAVVDHTCQLHLHIQSGVDVDKQVQQLSLRRDR
LLPKLEQLLLRQQEQDSQSKVPAHIREQTDSKTSALQQEVNTIEEQLKLLQETQTAE
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcacagatgtggagggcaggtcgtgtcctgactgctcggctgggggaccgaggagca
gccaggctgtgttcagggaccctccccaaacctccatcctctacctcatctccaccactg
tcctctcggccccaggcccagaagcggaggcgggagcgggaggaggccatactgtcaggt
caacacagtcctgctgaagacggagtgctgggatggagtgagaagcagaggatcgagtac
acggctcacacagctccggggacaaagaaagacaccagcctgccgctccccccctcctac
agtccggagtatgtggagtccagctggtaccagtggtgggagaaggagggcttcttcagt
ccagagcagcatgagaggttgccccacgctgtggatcagaccttctctctgtgtatcccc
ccccctaacgtgacgggcagtctgcacctgggccacgctctgactgtggctgtggaggac
gctctggtccgatggcgcaggatgcagggccacagggtgctgtgggtcccaggctgtgac
catgcaggcatcgccacacagacagtggtggagaggaggctgctgagggagacaggcagg
cgcaggcaggacttcaccaggcaggagtttctgagggaggtgtggaaatggaagaacgag
aggggagaggagatctaccagcagctgaggagtctgggagcctctctggactggagcaga
gcctgcttcaccatggacccagtgttcagcagggcggtgagcgaggccttcgtcaggctg
gctgactcggggaggatctaccgctctgaggctctggtcaactggagctgtgctctggag
tcggccatctcagacatcgaggttgactccaaagatctgagtggccccaccctgctgtgt
gtccctggttatgacaacaaggtggagtttggaaccatgctcacctttgcgtacgccata
gaaggccacgatggagaagtggcggtgtccaccacccgtcctgagaccatgctgggggat
gtggctgtagctgttcaccctgaagaccctcgctaccaggcctttcatgggaagcagtgc
agacacccgttcaccagcagactgctgcccatcatcactgaccctctggtggacatggag
ctgggaactggtgcagtgaaggtgacccccgctcatgaccacactgacttcctgttgtca
cagagacactcactgccacgcctcactgtgattggtggagacgggaacatgacgacggcc
tgcggacagtggctgcagggagtgaagcgcttcgatgccaggcagatggtggtggacgct
ctggtggagaggaagctgttcagaggaaagaagaaccacgccatgactttacccgtctgc
agccgctcaggagacatcattgaacctcttctgaagaagcagtggtttatcagctgtgat
gaaatggcaaaacaggctatccaggctgtggaggacgggcagctgcagatcgtccctcac
tactacagcaagacctggaggaactggctgtccaacatcagtgattggtgcatctccagg
cagctctggtggggtcatcagatccccgcctaccaagtgcagctccctgactccacaaac
acacaggaggagcggtgggtttggggacggagcgaggacgaggcccgacaaagagccgct
gtcagatatggagtgaagcccgaggatatcactctgactcaggacccagatgtgctggac
acgtggttctcctcggggctgttccccttcgccatgctgggctggcctgagcagacccct
gacctgcagcatttctaccccaactccctcctggagacgggcagtgacctcgtcttcttc
tgggtggccaggatggtgatgctgggcacagagctgaccggacagctgccctttaaacag
gttctcttccactctatggtgagagataagcatggcaggaagatgagtaaatctctggga
aatgtcatcgaccctttagatgtgatacatggggtctctctggagagacttcaagagaaa
gtgcaggagggaaacctggagccccgggagcatctggtttccatggaagcgcagaggaaa
gacttccccagagggatccctcagtgtgggaccgatgctctgagattcgccctctgctct
cacaagatgcagggagaggacatcagtctgtccatatctgaggtcctgagctgcagacac
ttctgtaacaagatgtggcagacgctgaagttcacgctgggagtgctgggggacagctcc
acaccagtgacaacactggagcagacggcagcagtgggcagcatggagcgctgggtctgc
tcccggctgtacagcaccgtgctgcagtgtgagcagggcctggaggcctctaagctgcac
accgtcacctcagccctgcactccttctgggtgcacagcctgtgtgacgtctacatggag
tgtgtgaagcctgtgctggcgctgcccccggacacagagcagagtgtgggggctcagcag
ggggtccgcagcgtcctcttccactgtgtgtccgtgtctctcgccctgctctcccccttc
atgcccttcatcactgaggagctgtggcagaggctccagcccttcagccctgctgctgcc
gcttccccccccaccctgtgtctgcagccgtacccccgctcctcccagctggcacactgg
cacttccctgacgaggagagagacttcctgttggtgcaggaagtgatccgagcggcccga
tcgctacgagcccagtgtggcatgaccaaagaaaaacctgccatgtgggcggtgtgctcc
cccagccaggctcaggtcctgcttcacttcggatcagctgtctggactttatgccgtatc
tccagcctccatatccactgtcctgatggagcagagtgcccccctgctctcctctccacc
cccccacctacaggcagcctggtggctgtggtggaccacacctgtcagctacacctccac
atccagagtggagtggacgtggacaaacaggtgcagcagctgtccctgcgcagagacaga
ctcctcccaaagctggagcagctcctcctcagacagcaggagcaggactcccagagcaag
gttcctgctcacatcagggagcagacggacagcaagacgtcggccctgcagcaggaggtg
aacaccatcgaggagcagctgaagcttctgcaggagacgcagacagcagaataa
DBGET
integrated database retrieval system
