Trematomus bernacchii (emerald rockcod): 117479363
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Entry
117479363 CDS
T09643
Name
(RefSeq) glutamate receptor-interacting protein 2-like isoform X1
KO
K20251
glutamate receptor-interacting protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117479363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117479363
Membrane trafficking [BR:
tben04131
]
Protein recycling
Others
Glutamate receptor-interacting proteins (GRIPs)
117479363
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
117479363
NCBI-ProteinID:
XP_033982182
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MSMSARVAFGKGRLTPKQLSFAFPQSDSLRKGSRCAGGKRRMFSFSIRCRLGIIRGRTKD
EGPYSKGSKDSAAPDQSGSSYRRSFSEECRGVTTVDLMKREGSSLGLTISGGSDKDGKPR
VSNLRPGGLAARSDQLNVGDYIKSVNGINLSKLRHDEIISLLKNIGERVMLEVEYELPPF
VQNPSGVSTKTIEVCLHKEGNSFGFVMRGGFHEDWRRSRPLLVTYVRPGGPADREGTLKA
GDRVVSVDGMPLNREKHADSLTMLMQSGQEALFLIEYDISVMEAVQRASGPLLVEIVKGP
STSLGIGLTTTIYRSKQVIIIDKIKAGSVVERCGALHAGDILLSIDGTGTEHCSLMEATQ
LLASTTDVVKLEILPASQSRLPVRPQDTVKVQKSNNHHWDQSSNYCHPPHASHGKTWSSP
SHPHNQQDHCKSVVSGGFSPSSTATSGFSSQGSNTLPCPIPPSSPRNSTGRRRNRKKDHK
SSLSLASSSVGPGGQIFHVETSEVILRGDPLTGFGVQLQGGVFATETLSAPPVIRFIEPD
SPAERCGLLQVGDRLLSINGIPTEDGTLEEAHQLLRDSALANKVTVEIEFDVAESVVPSS
GTFHVKLPKRRGVELGITISASKKPGKPLIISDIRKGSIAHRTGTLEPGDRLLAIDSVRL
ENCSMEDAMHVLQQAEDMVKLRIQKDEDNIDELEMSGSIIYTVELKRYNGPLGITISGTE
EPFDPIVISGLTKKGLAERTGAIHIGDRVLAINGVSLKGKPLSEAIHLLQMAGESVTLKI
KKQADKSDGRRPLDRETGFLSDTEDELTDSQKTSKHSEVYSATLPSLDSAMSSWDSSGFD
AGYGSQGTYLHKASDLLLNPNDWRRTKLRSQIGSSSAGLVHHSALYDGRFTEDEWDNRPG
FVSPPRCHGTLNQDDSFWSQALQDLETCGQSEILRELEASMTGSALSLYLEETKTNDDSM
FRSEISPIKREAMHFESNNKNNLHMLTGSRDLPPRGRGDPSDIVSPTTLALHKVTLRKDP
DSNDFGFSVSDGLLEKGVYVNMIRPDGPADKAGLKPFDRILQVNRARTRDLDCCLTVPLI
IEAGAALDLVISRNPLAADPGRPDDSNDRSHSLFCFHEQPRTNSIAL
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgtcagcacgggtcgcgtttggaaaagggcgcctcactcccaagcagctctcc
ttcgctttccctcagtcagattccctgaggaaaggcagccggtgtgcaggaggaaagagg
aggatgttctcattttctataagatgtcgactgggcatcatcagaggcagaaccaaagat
gaagggccatactcaaaggggagcaaggactctgcggcacctgaccaatcaggttcgtcc
tacaggcgcagcttctcggaggagtgccgaggagtgaccacagtggacctgatgaaaagg
gaaggcagcagccttggcctcaccatctccggaggctcagataaagacggcaagcccaga
gtgtcaaacctacggccaggtgggctagctgccaggagtgaccagctgaatgttggagac
tacatcaagtcagtgaacggcatcaacttgtcaaagcttcgccacgatgagatcatcagc
ctgctgaagaacatcggggagcgagtcatgctggaggtggagtacgagctgcctccattt
gtccagaacccatcaggcgtctcaaccaaaaccatagaggtgtgtttacacaaggagggg
aacagctttgggtttgtcatgagaggaggcttccacgaggactggcgcaggtcacgacct
ctattggttacatacgtcaggcctggaggtcccgctgacagagagggcactttgaaggca
ggagaccgagtagtgagcgtagacgggatgcctttaaacagggaaaagcacgctgactct
ttgaccatgctgatgcagagcggccaggaagctctgttcctgattgagtatgacatctct
gtcatggaggcagtgcagcgagcctcgggccctctgctggtggagatagtgaaaggtccc
tccaccagccttgggatcggcctcactacaacaatatacaggagcaaacaagttattatt
atagacaagataaaggcaggcagcgtggtggaaaggtgtggagcgctgcacgcaggtgac
atccttctgtctatagacgggaccggcacggagcactgctctctgatggaggccacgcag
ctgctcgccagcaccactgatgtcgttaaactggagatcctccccgccagtcagagcaga
cttcctgtcagaccgcaagacacagtaaaagtgcagaagagcaacaatcatcactgggac
caaagcagcaactactgccatcccccacatgccagccacgggaagacatggagcagccca
agccacccacacaaccagcaggaccactgcaaatcggtggtgagcggtggcttctctcct
tcctccacagccacctcaggcttcagcagccaggggagcaacacgctgccctgccccatc
ccccccagcagcccccgaaactccacgggccggaggaggaacaggaagaaggaccacaaa
agctcactatctctggcttccagttctgttgggccgggggggcagatctttcatgtggaa
acgagcgaggtcatcctgaggggggatccgctcacaggttttggggtccagctgcaagga
ggtgtcttcgccacagaaacgctgtctgctcccccagtcatccgctttattgagcccgac
agcccagctgagaggtgcgggctgctgcaggttggggaccggctgctgtccattaacggg
atcccgactgaagatggcactttggaggaagcccatcagctgctcagagactctgctctg
gccaataaggtcacagtggagattgagtttgatgtcgcagagtcagtggttcccagcagc
ggcaccttccacgttaaactacccaagaggagaggagtggagctgggcatcaccatcagt
gcaagtaaaaaacctggaaagcccctcatcatctccgacatcagaaaaggaagcatagca
cacagaacaggcactctggagcctggagaccggctgctggccatcgacagcgtgcgtctg
gagaactgctccatggaggacgccatgcacgtcctgcagcaggccgaggacatggtcaaa
ctccggatccagaaagacgaggacaacattgatgagttggagatgtcgggctctataatc
tacacagtggagttgaagagatataacggaccgctaggcatcacgatctctgggacagag
gagccctttgaccccatcgtcatttcaggcctcaccaagaaaggcctggcagagaggacc
ggagcaatccatataggagaccgagtgctggccatcaacggggtcagtctgaaggggaag
ccgctgagcgaggccatccacctcctgcagatggccggggagtctgtcaccctcaagata
aaaaaacaagctgacaagtctgatggccggcggcctctggacagagaaactgggttttta
agcgacacagaggatgagctgacagactcccagaaaaccagcaaacactcggaggtctac
tctgccactctgcccagtttagactctgccatgagctcctgggatagctcagggttcgat
gcaggctacggtagccaagggacatatctccacaaagcctcagatctattgctcaatcca
aatgactggcgacgcacgaagctcaggagccaaatcggctccagctctgcaggcctggtc
caccactcagcgctgtacgatgggaggttcactgaggacgagtgggataatagacctgga
ttcgtcagcccccctcgttgccatggcaccctgaaccaggatgacagcttctggtcccag
gctctgcaggacctggagacctgcggacagtcggagatactcagggagctggaggcatcc
atgacaggtagcgctctcagtctgtacctggaggaaaccaagaccaacgacgactcaatg
tttcgctctgaaatcagtcccattaaaagggaagcaatgcacttcgagtctaacaacaaa
aacaacctgcacatgttgactggaagcagagacctacccccccggggcagaggggacccc
tcggatatcgtgtcccctaccacgctggcactgcacaaggtaaccttaaggaaggacccc
gacagcaatgactttggcttcagtgtatccgacgggcttctggagaaaggagtttatgtc
aacatgatccgccccgacggcccagctgacaaggcggggctgaaacccttcgaccgcatt
cttcaggtgaaccgagccaggaccagggacttggactgctgtctgactgtacctcttatt
atagaggcaggggccgccctggacctggtcattagcaggaatcctctggcagcagacccc
gggcggcccgacgactccaacgaccgctcacattcactgttctgctttcacgagcagccc
aggaccaacagcatcgccctgtga
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