Trematomus bernacchii (emerald rockcod): 117479374
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Entry
117479374 CDS
T09643
Symbol
brpf1
Name
(RefSeq) peregrin isoform X1
KO
K11348
bromodomain and PHD finger-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117479374 (brpf1)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
117479374 (brpf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H_2
EPL1
zf-HC5HC2H
Bromodomain
PWWP
PHD_2
PHD
PHD_NSD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
117479374
NCBI-ProteinID:
XP_033982208
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MGLDFDVKTFCHNLRATKPPYECPVESCRKVYKSYSGIEYHLYHYDHDNPTPAQTVPQKK
RKGRPPRASLAGSGDTDDGGGNGGGGLGHGGNTPGSPNQSDHSNSPGRETMTYAQAQRMV
ELDFQGRIHRISIFENIDVVSEEDSDAEDAPTSGTGGGGGGVCNGSDGGGSEVGGGGKDR
TDIPSSNGGKSTPKSGKHKSKEKKKDGSSHHHSAQSGPAIKLPEAVFRELDQERPEAPPR
PASYYRYIDKSVEELDEEVEYDIDEEDYIWLDIMNDKRRRDGVTPIPQEVFEYLMDRLEK
ESYFESHNKADPSTLIDEDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQ
WLCRRCLQSPSRAVDCALCPNKGGAFKQTDDARWAHVVCALWIPEVCFANTVFLEPIDSI
EHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETGANGT
SFSVRKTAYCDIHTPPGSARPLAGVGGASMGSSHSEGELEEDDEPSICHDDDSKGWSSER
AKRAKAKSRLKMKRARKILAERRAAAPVVSVPCIPPHRLSKITSNLTVPRKSQFMQRLHS
YWTLKRQSRNGVPLLRRLQTHLQSQRHIEPLSPPTPEQLPSEPCDIVLQMDDEEKPCALK
EQLKAWQRLRHDLERARLLVELIRKREKLKRETIKVQQMALEMQLTPFLVLLRSTLEQLQ
ERDINNFFTDPVPLAEVPDYLDHIDTPMDFQTMWNLLESHRYLTFEAFESDFGLIVNNCL
KYNAKDTVFYRAALRLREMGGSVIRTARRHAERIGFDYEAGLHLPREPSPDSQRDQDRDR
ERERERERERERERERERERERERSRDRDRDRDRDRDRDRDRDRDRDRPLSSNEEEVLLP
ENRRRLPLDEQLHYLQVRLDEVSSGKHSIGQSRRAKALRKEISVIKRKLVHQQEGGSGMG
GRDSVGGDRGSLPHHPSSSGHHDEGGESSSQEIGEKDMSVSSSALAPEVGRRTSVLFSKK
NQKIAGPPKRPGRPPKNRDAGYAVGLQSPIGPPQLPMLSPSRPRKRPRSPRSSSSSDSDS
DNDDMLPGLPTNGFNGGTQPVKESFCVYRSESRLPRSSSDSESTTSSSSSAASDRTSTTP
SKQGRGKASFSRSAFQEDSSEETSGTENDSYSVGGSRPVSHSLDLVWAKCRGYPSYPALI
IDPKMPREGVFHRGVPIPVPPLDVLKLGEQMTQEAREHLFLVLFFDNKRTWQWLPRSKLV
PLGVDQELDKEKMLEGRKSNIRKSVQVAYHRAMQHRSKVQGDPSSETSDSD
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atggggctggactttgatgtaaagacgttctgtcacaacctgcgggccaccaagccccct
tatgagtgccctgtggagtcctgccgtaaggtctacaagagctacagtggcattgagtat
cacctgtaccactatgaccatgacaacccaactcctgcacagactgttccccagaaaaag
agaaagggacggcctcctcgcgcctcattggctggctcaggggatacggacgatggtgga
ggtaacggtggtgggggactggggcacggggggaacacgcctggtagccccaaccagtct
gatcactctaactctccgggcagggagacaatgacttatgcccaggcacagcgcatggtg
gagctggacttccaaggacgcatccaccgcatcagcatctttgagaacattgacgtggtg
tcagaggaagatagtgatgcagaggatgctccaacatccggaactggtggtggtggtgga
ggggtttgtaacggtagcgacggcggaggcagcgaggtaggaggtggtggcaaggaccgg
acagatatcccctcctctaatggcggcaagtccaccccaaagtctggaaaacataagagt
aaagaaaagaagaaggacggttcatctcatcatcacagcgctcagtccggccctgcaatc
aagctccctgaggcggtgttcagagagctggaccaggagagacctgaagcccctcctcga
ccggcatcttactacaggtacattgacaagtctgtggaggagctggatgaggaggtagag
tacgacattgatgaagaagactacatctggctggacatcatgaacgacaagcggcggcgc
gacggtgtcactcccattcctcaggaggtctttgagtatctcatggaccgcctagagaag
gagtcttactttgagagccacaacaaggctgaccccagcaccctaatcgatgaagatgct
gtctgctgcatctgtaacgatggggagtgtcagaacagcaatgtgatccttttctgcgac
atgtgtaacctggcagttcaccaagagtgctacggtgtgccctacatcccagagggccag
tggttatgtcggcgctgccttcagtcgccgagtcgagctgtggactgcgctctctgcccc
aacaagggaggcgccttcaaacagacagacgatgcacgctgggcgcatgttgtctgtgcc
ctctggatcccagaggtctgttttgccaacacagtcttcctggagccgatagacagtatt
gagcacattccccccgcacgctggaagctcacctgctacatctgcaagcagcgaggttca
ggtgcctgcatccagtgtcacaaagccaactgttacacagccttccacgtcacctgcgct
cagcaggcgggcctctacatgaaaatggagccggtcagagagacgggggccaacggcact
tcttttagtgtacgaaagacagcttactgtgacatccacacgccgccaggatcagcacga
cctcttgcaggagtaggcggcgcaagcatgggttcctcccacagcgaaggagagctggag
gaggatgacgagccgagcatttgccacgatgatgactccaagggctggagctctgagcga
gccaagagggcgaaagccaagtccaggctgaagatgaaaagagcgaggaagatcttagct
gagaggagagctgcagcgccagtggtgtctgtgccctgcatacccccccacaggctgagc
aaaatcaccagtaacctgactgtacccaggaagagccagttcatgcagcgcctccacagc
tactggaccctgaagaggcagagtcgtaacggcgtgcctctgctacgccggctacaaacc
cacctgcagtcccaacgacacattgagcccctctcaccaccaactccagaacaactcccc
tcggagccttgtgacattgtgttgcagatggacgacgaggagaaaccctgtgctctgaag
gagcagctgaaggcctggcagagactgagacacgacctggagagagcccggctgctggtg
gagctcatacgcaagagggaaaaactcaaaagggagacgattaaagtgcagcagatggcg
ctggagatgcagctgacgcccttcctggtgctgctgaggagcacgttggagcagctacag
gagagagacatcaacaacttcttcactgaccctgttccgctggcagaggtgccagactac
ctggaccacatcgacactccaatggacttccagaccatgtggaacctgctggagtcccat
cgctacctcacgtttgaggcctttgagtcagactttggcctcatcgtcaacaactgtctc
aagtacaacgccaaggacacagtcttctaccgcgcggcgctgcggctcagagagatgggg
gggtccgtcatcagaactgcccgacgccacgctgagcggataggcttcgactatgaggcg
ggcttacacctcccccgtgagccgagccctgacagccagcgagaccaagaccgagacaga
gagagggagcgagaacgggaacgagagcgagaacgagaacgggaacgggaacgggagcga
gaaagggagcgaagcagagacagagacagagatcgagacagagacagagatcgcgacaga
gacagagacagagatcgagacaggccattgtcttctaatgaagaggaggtgctcctaccg
gagaacaggcggcggctgcctctggacgagcagctgcactacctgcaggtgcgcctcgat
gaggtcagctcagggaagcacagcattggtcagtctcgtcgagccaaagctctgagaaag
gagatcagcgtcatcaagaggaagcttgtgcaccagcaggaggggggctctgggatgggg
ggccgggactctgtgggaggagaccggggttcactcccccatcacccgtcttcttcggga
caccacgatgaagggggggaaagcagcagccaggagatcggtgaaaaagacatgagtgtg
tcctcatcggccctggctccagaggtgggccgtcggacatctgtcctcttctccaaaaag
aaccaaaaaattgctggacctccgaaaaggccaggtcgccccccgaagaaccgggacgct
ggctacgctgtggggttgcaaagccccatcggccccccccagctgcccatgctgtccccc
agcaggccgaggaaaagaccccgcagcccccgcagcagctccagctccgacagcgacagt
gacaacgacgacatgctgccaggtttgccaactaacggtttcaacgggggaacccagcca
gtaaaggagagcttctgtgtgtaccgcagtgagtctcgtctccctcgatccagctcagac
tctgagtccaccaccagcagcagcagcagcgcggcctcagacaggaccagtacgaccccc
tctaagcagggcagagggaaggcgtcgttctcccgctcggccttccaggaggacagcagt
gaggagacgtcgggcactgaaaacgattcctactccgttggaggatcgcggcccgtttca
cattctctggacctggtgtgggccaagtgcagaggctatccttcatatccggctctgata
attgaccctaagatgcccagggagggggttttccaccggggcgtcccaatccctgtccca
cctttggatgtgctgaaactaggggagcagatgacccaggaggcccgggagcacctattc
ctggtgctcttctttgacaacaagagaacatggcaatggctaccgcgctctaagctggtg
ccgcttggggtggaccaggaactggacaaggagaaaatgctggaaggccgaaaatccaac
atccgcaagtccgtgcaggtggcctaccaccgcgccatgcaacaccgcagcaaggtgcag
ggagaccccagcagcgagaccagtgacagtgactga
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