Trematomus bernacchii (emerald rockcod): 117479445
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Entry
117479445 CDS
T09643
Symbol
snai1b
Name
(RefSeq) snail family zinc finger 1b
KO
K05707
snail 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117479445 (snai1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117479445 (snai1b)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
117479445 (snai1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-C2HE
zf-met
zf-C2H2_6
zf-C2H2_15
Zf-C2H2_ZNF451_6th
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
Zf-C2H2_ZNF451_1st
Zn_ribbon_8
zf-BED
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
117479445
NCBI-ProteinID:
XP_033982283
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MPRSFLVKKYFSSKKPYYRESYLESQTAFVPESFPRAELPMQNNSSALTCYPTIPFFSSM
DSLPAPLSPITPVSPALSPLGPLDLSSSPSSSSSSSSSSSSSSEEEEDGGRTSDPPSPDI
IQHIFHCLHCSKSYTSLSALSHHQTHCSPQQQTPTLPTVVSTRPAFHCKHCPKEYTSLGA
LKMHIRSHTLPCVCLTCGKAFSRPWLLRGHIRTHTGERPFSCQHCNRAFADRSNLRAHLQ
THSEVKKYQCGSCSRTFSRMSLLHKHTASGCCPAS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttcttttttagtcaagaagtatttttccagcaaaaaaccctactacagggag
agttatcttgagagccaaacagcttttgtcccagaaagctttccaagggctgaacttcca
atgcagaacaacagctccgccctcacctgctaccccaccatccccttcttcagcagcatg
gactccctgcctgcccctctgtcccccatcacccctgtttctccggccctttcaccactt
ggccctctggacctcagcagctctccctctagcagtagcagcagcagcagcagcagcagc
agcagcagtgaggaggaggaggatggcgggcgcacgtcagatcctcccagcccagacatc
atccagcacatcttccactgtctgcactgcagtaagagttacaccagcctctctgcactg
tcccaccatcagacccactgttctccacagcagcaaacgcccactctgcccactgtggtc
tctacacggccggctttccactgcaaacactgccccaaggagtacaccagcctgggagcc
ctgaaaatgcacattcgctcacacactctgccctgcgtgtgcctcacctgcggcaaggcc
ttctccagaccgtggcttcttagaggacacatccgcacacacacaggtgagcgccccttc
tcttgtcaacactgtaaccgagcctttgctgatcgctccaacctgcgtgcccacctgcag
acccactcagaggtgaagaagtaccagtgtggctcctgctcgcggaccttcagtcgcatg
tccctgctgcacaaacacaccgcctcagggtgctgcccggcctcatag
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