KEGG   Trematomus bernacchii (emerald rockcod): 117479445
Entry
117479445         CDS       T09643                                 
Symbol
snai1b
Name
(RefSeq) snail family zinc finger 1b
  KO
K05707  snail 1
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:tben00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    117479445 (snai1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tben03000]
    117479445 (snai1b)
Transcription factors [BR:tben03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    117479445 (snai1b)
SSDB
Motif
Pfam: zf-C2H2 zf-H2C2_2 zf-C2H2_4 C2CH-3rd_BIRD-IDD zf-C2H2_jaz zf-C2HE zf-met zf-C2H2_6 zf-C2H2_15 Zf-C2H2_ZNF451_6th zf-C2H2_7th_ZNF462 Zf-C2H2_ZNF451_C Zf-C2H2_ZNF451_1st Zn_ribbon_8 zf-BED zf-C2H2_11
Other DBs
NCBI-GeneID: 117479445
NCBI-ProteinID: XP_033982283
LinkDB
Position
Unknown
AA seq 275 aa
MPRSFLVKKYFSSKKPYYRESYLESQTAFVPESFPRAELPMQNNSSALTCYPTIPFFSSM
DSLPAPLSPITPVSPALSPLGPLDLSSSPSSSSSSSSSSSSSSEEEEDGGRTSDPPSPDI
IQHIFHCLHCSKSYTSLSALSHHQTHCSPQQQTPTLPTVVSTRPAFHCKHCPKEYTSLGA
LKMHIRSHTLPCVCLTCGKAFSRPWLLRGHIRTHTGERPFSCQHCNRAFADRSNLRAHLQ
THSEVKKYQCGSCSRTFSRMSLLHKHTASGCCPAS
NT seq 828 nt   +upstreamnt  +downstreamnt
atgcctcgttcttttttagtcaagaagtatttttccagcaaaaaaccctactacagggag
agttatcttgagagccaaacagcttttgtcccagaaagctttccaagggctgaacttcca
atgcagaacaacagctccgccctcacctgctaccccaccatccccttcttcagcagcatg
gactccctgcctgcccctctgtcccccatcacccctgtttctccggccctttcaccactt
ggccctctggacctcagcagctctccctctagcagtagcagcagcagcagcagcagcagc
agcagcagtgaggaggaggaggatggcgggcgcacgtcagatcctcccagcccagacatc
atccagcacatcttccactgtctgcactgcagtaagagttacaccagcctctctgcactg
tcccaccatcagacccactgttctccacagcagcaaacgcccactctgcccactgtggtc
tctacacggccggctttccactgcaaacactgccccaaggagtacaccagcctgggagcc
ctgaaaatgcacattcgctcacacactctgccctgcgtgtgcctcacctgcggcaaggcc
ttctccagaccgtggcttcttagaggacacatccgcacacacacaggtgagcgccccttc
tcttgtcaacactgtaaccgagcctttgctgatcgctccaacctgcgtgcccacctgcag
acccactcagaggtgaagaagtaccagtgtggctcctgctcgcggaccttcagtcgcatg
tccctgctgcacaaacacaccgcctcagggtgctgcccggcctcatag

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