Trematomus bernacchii (emerald rockcod): 117479527
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Entry
117479527 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: IQ motif and SEC7 domain-containing protein 1-like
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117479527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117479527
Membrane trafficking [BR:
tben04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117479527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
bZIP_2
RHG20_PH
BMFP
bZIP_1
Motif
Other DBs
NCBI-GeneID:
117479527
NCBI-ProteinID:
XP_033982435
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MENPTENPTRAVEYLKELNKIIETQQELLERQRERIEELEQQVSDLCSENGCLKEQYKRH
LANCRLLQGTNSLLTLGAIKEHITQEKSECDSSRMVRRHASLPVEVHENPGRSVSTGCRR
VAPCRKWKSASFGVEGDGRPNESGPSLDGGASYGQGPVTHGSAISPDRFDSPLYSHGVQP
GPQRPRRAKLQHSQSIIRKQAEEEAIKRSRSLSESYELSADLQDKQVEMLERKYGGRFIT
RHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQLSFEGPEKVHSSYFEG
RQVSMTEDGAPLSMVQSERGDIEVHQQANMAPHPTPQGDLTDAITELEDAFSRQVKSLAE
SIDDALNCRSLQGDEGPDPEAMGCSKVEREGPYQVKSHRRAAGRMHDETLASYNDVTLFI
DEEDMNPSMARSRSGDQPSSTESDLRLRSVNSSQEYWPIDPKDEGRDTDTSCRSTPSLEC
QEQRLRMDHLPLLTIEPPSDSSAEISDRSDRGSVKRPPVYEPHGHIVTSSQASPKHISHG
PPPRASSRDEDPPLRHRHRQLEGHLAINGSANRQSKSESDFSDGDNDSINSTSNSNDTIN
CSSESSSRDSLREQTLSKQTYHKETRNSWDSPIFSNDVIRKRHYRIGLNLFNKKPEKGIQ
YLTERGFIPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFQSMEL
DEALRKFQNHIRVQGEAQKVERLIEAFSQRYCICNPTVVRQFRNPDTIFILAFAIILLNT
DMYSPNVKPERKMKMEDFIKNLRGVDDGEDIPRETLVGIYERIRKRELKTNEDHVSQVQK
VEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKLQKLGLHQREIFLFNDL
LVVTKIFQKKKNSVTYSFRQSFSLYGMQVILFDNQYYPNGIRLTSAIPGADIKVLINFNA
PNPQDRKKFTDDLRESIAEVQEMEKYRIESELEKQKGVVRPSMSQSSGLKKESGNGNMNR
ASLDDTFAMGEGLKRSALSSSLRDLSDAGKRGRRSSAGSLDSNMEGSIISSPHTRRRATT
PHEGDPRGPPSIPNSASTSILGSLFGSKRGKPSSLSHAPYPAPGQPTLISHKPHPTNLHH
TAQTAHTVQLHSPHSQYCQVPQNPPPYNHHHHYQPPPHTQHHQHPGYTSHQPPPQQHSHY
SQHSHHASHSQHAPHHHSQQVGSAPGGPKPKHSGISTVV
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacccaaccgagaaccctaccagggctgtggaatatttgaaggagcttaacaag
atcatcgagacccagcaggagttgctggagaggcagagggaaaggatcgaggagctggag
cagcaagtgtccgacttgtgctcggagaacggctgtctgaaggagcagtacaagcggcac
ctggcgaactgcaggctgctgcaaggcaccaacagcctgctcaccctgggggccataaag
gaacatatcacacaggaaaagtctgaatgtgactcttccagaatggtcaggagacatgcc
tccttaccggtcgaagtccacgaaaaccccgggaggtcggtgtctacaggctgcagaaga
gtcgccccctgccgtaaatggaagtctgcttcctttggtgtggaaggggatggacggccc
aatgagagtggcccttccctggatggtggagccagctatggccagggcccggtgactcac
ggctcagccatcagccccgaccgatttgacagcccgctttacagccacggtgtccagcct
ggccctcaaagaccccgtcgagccaaactccagcactcgcagtccatcatccgtaagcag
gctgaggaggaggccatcaagcgttcccgctcgctctccgagagctatgagctctctgct
gacctccaggataaacaggtggagatgctggagcgtaaatatggtggacgattcataact
cggcatgcggcccgcaccatccagacagccttccgccagtatcagatgaacaagaacttt
gaacgtctcaggagctctatgtctgagaaccgcatgtccagacgcatcgttctctccaac
atgaggatgcagctctcgtttgagggtcctgagaaagtgcacagctcctactttgaagga
aggcaggtttccatgacggaggatggcgccccactgtccatggtgcagtctgaacgtgga
gatatagaggtacaccagcaggccaacatggcgcctcacccaaccccacagggtgacctg
acagatgccatcacggagctggaggacgccttttcccggcaggtcaaatctctggccgag
tcgattgacgatgctctaaactgtcgcagccttcagggcgacgagggtcccgacccagag
gccatgggctgctctaaggtggagagggaagggccctatcaggtgaagtcccaccgcagg
gcagctggacgaatgcatgatgaaacattggcatcctataatgatgtcactctgttcatc
gatgaggaggacatgaatccttctatggctcggtcgaggtcgggggaccaaccctccagc
acagaatcagacttgcggttgcggtcagtcaactcctcacaggaatactggcctattgac
cccaaagatgagggtcgtgacacagacacgagctgccgcagcactccttctctagagtgc
caagagcagcgcctcagaatggaccatcttcctttgttgaccatcgaacctcctagtgac
agctcagcggagatcagtgaccggtctgaccgtggatctgtcaaacggccgcctgtgtac
gagccgcacggccacatcgtgacgtcctcccaggcgagccccaagcatatttcccacgga
cccccgccacgagcttcctcccgtgatgaagacccaccgctgcgccatcgccaccgtcag
ctggaaggacacttggctataaacggctcagccaacaggcagagcaagtctgaatccgac
ttctccgatggggataacgacagcatcaatagcacatccaactctaacgacaccatcaac
tgcagctccgagtcgtcgtcgagagacagcctacgagagcagacgctcagcaagcagacg
taccacaaagagactcgcaacagctgggactcgcccatcttcagtaatgatgttattcga
aagagacactaccgcatcggcttgaatctcttcaacaagaagccagaaaagggcatccag
tacttgactgagagggggttcatccccgacacaccggttggtgtggctcacttcctgctg
cagaggaaggggctcagcaggcagatgattggagaatttctcggaaatcgacagaaacag
ttcaacagagatgttttggactgtgtggtggatgaaatggacttccagagcatggagctg
gacgaggctctcaggaaatttcagaaccacatccgtgttcagggtgaggcccagaaggtg
gagcggctcatcgaagccttcagccagcgctactgcatctgtaaccccactgtggtgcga
cagttcaggaaccctgacaccatcttcatcctcgcttttgccatcatcctcctcaacact
gacatgtacagccccaatgtcaagcccgagaggaagatgaagatggaggacttcatcaag
aatttaagaggtgtggatgatggagaggatatccccagggagactctggtcggcatctat
gagaggatccgtaagcgagagctcaagaccaacgaagaccacgtctcgcaggtgcagaag
gtggagaagctcatagtgggaaagaaaccaattggatccctccaccacggcttgggatgt
gtgctgtcactgccccatcgccggctggtgtgttactgccgcctgtttgaagtgccagat
cccaacaagctgcagaagctgggcctgcatcagcgggagatcttcctgttcaatgacctc
ctagtggtaaccaagattttccagaaaaagaagaactcagtgacgtacagcttcagacag
tccttctctctgtatgggatgcaagtgattctgtttgacaatcagtattacccaaatgga
atcagacttacatcagcgataccaggtgctgacatcaaagtcctcatcaactttaatgcg
cccaacccccaagaccgcaagaagttcacagacgacctacgagagtccattgctgaggtc
caggaaatggagaaatacagaatagagtccgagctggagaagcagaaaggagtggtgagg
cccagcatgtcgcagagctccggtctgaagaaggaatctggaaacgggaacatgaaccgt
gccagtctggacgacaccttcgccatgggtgagggcctgaagaggagcgccctcagcagc
tcgctgcgagacctctccgacgcaggcaagcgggggcgtcgcagcagtgcaggatcacta
gacagcaatatggaaggctccatcattagcagtcctcacacacggcggagagccaccacg
ccacacgagggcgacccccgcggccccccctccatccccaactccgcatcgacttccatc
ctcgggtcgctatttggcagcaagcgaggcaaaccgtcatcgctgagccacgccccttac
cccgcccccggccaacccactctcatttcccacaagccccaccccaccaacctgcatcac
acagcacagacggcacacacagtgcagctccactctccccactcccagtactgccaagtc
ccccagaaccccccgccgtacaaccaccaccaccactaccaaccgcccccccacacgcag
caccaccagcacccgggatacacctcacaccaacccccccctcaacagcacagccactac
agccagcattcccatcacgcctcacactcccagcatgcccctcaccaccacagtcagcag
gtgggttcggcgcctggcggacccaaacctaaacacagtggcatcagcaccgtagtgtga
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