Trematomus bernacchii (emerald rockcod): 117479575
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Entry
117479575 CDS
T09643
Symbol
uhrf1bp1
Name
(RefSeq) LOW QUALITY PROTEIN: UHRF1-binding protein 1
KO
K28453
bridge-like lipid transfer protein family member 3A
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117479575 (uhrf1bp1)
Membrane trafficking [BR:
tben04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117479575 (uhrf1bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLTP3A_B
VPS13_N
Motif
Other DBs
NCBI-GeneID:
117479575
NCBI-ProteinID:
XP_033982550
LinkDB
All DBs
Position
Unknown
AA seq
1333 aa
AA seq
DB search
MAGLIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLSNLELDEEVLQNMLDLPTWLAVTR
VYCNKAAIRIQWTKLKTSPICLFLDKVEVEMRTCEEPRPPNGPSPIAITAGQSEYGFAEK
VVEGMSVRINNITIKVQARAFHASFELWQLQGNSLNPKWESSDLRYTRVTDPKRGEVLTF
KEINWQSLRIEADAIESNDQDLGSTPLRLITNQGRIRIALKRRIKDCNVLASKLLFILDD
LLWVLTDSQLKAIIHYAKSLSEAMEKSAQQRKSRTAESLQTAPPSPGLHNLWTETPXPAP
AGPPSTTSQYFDLYDVKESSYHTFISRLDLHICNDSSSLDDDEAPPPGLQGAMQLTFRKL
GFDYYPVHRPADGCRHWERYSGAMEAQAQWAGKLLQEYQRRVQAAGIPGPHSEAPQPNKD
SPAKTVRDGQSSPKSGPFPSEQATGRTCTAPSGSSLKRLRSCCVVVRVDDVDIHQVSTRG
RQNKKTRSFLSCNRKALRLPDNVPAIHLQFTEYYFPDNTSFTVPTSNLYAQLNGLQLCVD
PASVLWINLFSRGLLHTLDQVKAFYHLQDSCRAEEHVDVRLDAAQLKLIIPLDSSILDHP
ERPQSLSVTVPQMVLSNTRLCPHGSRADLNSTFEKFSSCPFFQHTPPCPYPRDQSAFHPL
PSTFLQHSQDTEPQPFDRKQLRPQDVWSLSLSRVTLGFDGARRFPKGKTQPFVEPFAVSV
WMCQPSALKNGFSSSSSSPSLAHQLSSEQEEASLASVHFLAHTITPVKMWLNHYQYVALL
RMKDSMARLGGELGRDLRDVKEAQGKKTKPATVCLSLLVDSAELGLLLPPACTEPEEEVP
HTPETDSGSMTDSDISPTHHSTVLEDSGLENGVSSINTGSAFDQDEQDGVVEEACEAIEE
GDGLTTERDIHVLSPGHSPALSREPSNFSLEGELSSAITVTKDATKDALSASLDLTKGAF
SMTKDAFSMLSRGTGMSKLFSPQAKELVQRSDESSPSLAASLHRQSMKQSPSQHSFDSAI
LDGSLPDENLSVDSDFSENFVVLMDSEFGTESMRPNNTGSRGSPAPGTEGGSSADLSSSL
SQSIEDVSQDMSSVLLLVLSGTACTMEVKGEDQVVAVEAQNLVPVQMGNIRVSDLLAGLV
QAPVLPPQDRPGVRGCPVVCLRAEMGPSAARHSGQAETLGYMEMRVQNCKVELLSSTVTN
IGPFLEDEFSADSPPMKLHMSNITVTLKDDSPKIYPTAPQPVPASFIVDQLLLERCEDGM
MRLKAEGSDPKVSACVPVAAPDNPNCSNSVQQQSERQTLECQLSEAQAALTQALSEREKL
LLEVRKHDPAFTF
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggccggattaatcaaaaagcagattctgaaacatttgtcacggttcaccaagaatctg
tcccctgacaagatcaaccttagcacgttgaagggggaggggcagctgtccaacctggag
cttgacgaagaggttctgcagaacatgctggacctgccaacctggctggctgtcacccgg
gtctactgcaacaaggccgccatcaggatacaatggacaaagttgaaaacaagccccatc
tgtctgttcttggataaggttgaggtggaaatgcggacatgtgaggagccgcgtccacca
aacggcccctctcccatagctatcacagcaggacagagtgagtacggctttgcagagaaa
gtggtggagggcatgtcagtgaggatcaacaacatcaccatcaaggttcaggctcgtgcc
ttccacgcctccttcgagctctggcagttacaaggaaacagcctgaaccccaaatgggag
agcagtgacctccgatacacccgtgtcaccgacccgaagagaggagaggtgttgacattc
aaagaaataaactggcagagtctgcgtatcgaggcggatgccattgagagtaacgaccag
gatcttggtagcacgccgctccgtctcatcaccaaccagggacgcattcgcatcgctcta
aagcgcagaataaaggactgtaacgtgctggcatccaagctgctcttcattctggacgac
ctgttgtgggtgctgacggactctcagctcaaagccatcatacattacgccaagtctctg
agcgaggccatggagaagtcggcccagcagaggaagagcaggacggcagagtccctacag
accgctcctccttctcctggcctccacaacctgtggacagagacccccnnccccgcccct
gctggcccccccagcaccaccagtcaatactttgatctctacgatgttaaggagtcttct
taccacaccttcatttcccgcttggacctacacatatgcaacgacagctcttcattagat
gatgatgaggctcccccaccgggcctgcaaggtgccatgcagctgacattcaggaagctg
ggctttgactactatcccgtccacagaccggctgatggatgtcggcactgggagcgctac
agtggagccatggaggctcaggctcagtgggccgggaaactcctgcaggagtaccagagg
agggtccaggctgctgggatccccgggccccactctgaggccccccagcccaacaaggac
tcccccgcaaagacagtacgagatgggcagtccagccctaagtcgggacccttcccctct
gagcaggcaacaggcaggacctgcaccgctccttcagggtcctcgctgaagaggctgcgc
tcctgctgcgtggtggtcagggtggacgacgtggacattcaccaggtgtctacaagaggc
cgtcaaaacaagaagacccggtcctttttatcctgcaaccgtaaagccttgcgtttacca
gacaacgtaccagcaattcatctgcagttcactgagtactactttcctgacaacaccagc
tttacagtgcccacctcgaacctgtatgcccagctgaacggcctgcagctctgtgtggac
ccagccagcgttctgtggatcaacctgttctccaggggtctgctgcacaccctggatcag
gtcaaagctttctaccatttgcaagacagctgcagggcagaagagcatgtagatgtgcgc
ttggatgcagctcagctcaagttaataatccccttggactcttccatattggaccacccg
gagcgcccgcagtccctctctgttaccgtcccccagatggtcctcagcaacacccgcctc
tgccctcacggctccagagcggacctgaacagcacctttgagaagttctccagctgccct
ttcttccagcacacgcctccctgcccttaccccagggaccagagtgccttccaccccctc
ccctccaccttcctccagcactctcaagacaccgagcctcaaccttttgacagaaagcag
ctacgaccccaagatgtctggtctctcagtctgtcccgtgtgaccctaggttttgacggc
gcccggcgattccccaaaggcaaaacacaaccttttgttgaacccttcgccgtgtctgtg
tggatgtgccagccctctgccttaaaaaacggattctcgtcttcctcctccagccccagc
ctagcccatcagctatcatcagagcaggaagaggcttcacttgcctctgtacacttcctg
gcccacaccatcactccagtgaagatgtggctcaaccactaccagtatgtcgccctgctg
aggatgaaggactccatggctcgtttggggggggagttaggccgggatcttcgagatgtc
aaggaggctcaaggcaagaaaacaaaacctgctacagtttgtctttccctcctggtggac
tcagcagaattgggtctcctgttgccaccagcgtgcactgagcctgaggaagaagtcccc
cacaccccggagacagacagcggcagcatgacagactctgacatctcccccactcatcac
tccacagtgctggaggacagcgggttagagaacggcgtctcctccatcaacaccggctct
gcgttcgatcaggacgaacaagacggggtggtggaggaggcttgtgaggccatagaggag
ggggacggtttgacaacagagagggacatccacgtcctctcacctggacactcccccgca
ctctcacgcgaaccgtccaacttcagcctggagggagagctgtcgagcgccatcaccgtc
accaaggatgcgaccaaagacgccctgagtgcctctctggacctgaccaaaggtgccttt
tcaatgacaaaggacgccttcagcatgctgagtcgtggcaccgggatgagtaaattgttc
agtccacaggcaaaggaactggtccagcgctcagatgagtcctccccctccctggctgcc
agcctgcaccgccaatccatgaaacagtcgccttcccagcattcctttgatagtgcgatc
ttagatggcagcctgcctgacgaaaacctctctgtcgacagcgatttcagcgagaatttt
gttgttctcatggactcagagtttgggacggagtccatgcgtcccaacaacacaggcagc
cgaggcagcccggccccgggcacagagggggggtcatcagccgacctcagcagctctctg
tcccaaagtatagaggacgtatctcaggatatgtcctcagtgttgctgctggtgctgagt
ggaacagcctgcacaatggaagtaaagggagaagaccaagtagtggctgtcgaggcccag
aatctggtcccggtgcagatgggtaatatcagagtatctgacctgctggctggcctcgtt
caagccccagtcttaccaccccaggaccggcccggtgtgaggggctgtcctgtggtgtgc
ctgcgagcagagatgggaccctctgcagcccgacactcaggtcaggccgagactctgggc
tacatggagatgagagtgcagaactgcaaggtggagctgttatcctccacagtgactaac
atcggtcctttcctggaagacgagttcagcgctgacagtccgccgatgaagttacacatg
agcaacatcacagtcactttgaaggacgatagccctaaaatctaccctacagcgcctcag
cccgtcccagcctctttcattgtggatcagctgctgctcgagcgctgtgaggacggcatg
atgaggctcaaagctgaaggttcagaccctaaagtctcagcctgtgttcctgtggcggcc
cccgacaacccaaactgttccaactctgttcaacagcaaagcgagagacaaactctggag
tgccagctctccgaggcccaggccgctctcacacaggccctcagcgagagagaaaaactc
cttctggaagtcaggaagcatgaccccgcgtttactttttga
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