Trematomus bernacchii (emerald rockcod): 117479599
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Entry
117479599 CDS
T09643
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tben01001
]
117479599
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117479599
Enzymes [BR:
tben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117479599
Protein kinases [BR:
tben01001
]
Serine/threonine kinases: Other
Other
117479599
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117479599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
WD40
LisH
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
117479599
NCBI-ProteinID:
XP_033982586
LinkDB
All DBs
Position
Unknown
AA seq
1561 aa
AA seq
DB search
MHLCGCAMASASASVDSKAELTALLEQWEREQQGSTQELVNIITKISELVEKETEEYHKA
DPDPFDDRHPGRADPECVLGHLLKILFKNDDFMNTLVNSYVMTSREFPLNAAACRLLQNI
MPGLETAVVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLV
PLMLHRLRELQDKDAENKREIKRPSPWKNLSEPLLTLDEETVDGSFEEKSFTPGRNGAER
EGTEEDGQIAFSTIEPENELSFRLNSPHKTSSHANSAVKTMMKPMSDPGSMTYQGMSDGS
SFLKRKADRESGRTSKQKLNFSLPDPDRNFSELSNSSWSEMSPWVIGNNYHLYPLTPEIE
QRLILQYLTPLGEYQELLAVFMQMGARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKK
FAAEFVAHGGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVGYTL
WLLECSHASGCCHATMFFSISFSFRAVLELFDRQDGLRRLVNLISTLEILNPEDQGALLS
DDEIFSSRQTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKAVSYTRD
QVVEMMEFLIEYGPLRLYWEPAEVFHKLSCVQLLLQLISIACDWSTYYGRSDTVRYALDI
LSILTVVPKTQMLLSEAVAVLDEGGSTVSTVGMSIVLAVAEGEVFVNDAEIQKSALQVAI
NCVCAPDKRVSSIGKFIAGTPRRRLPQQTKASESVLTKMWNVVQSNNGIKVLLSLLTVKM
PITDADQIRALACKALVGLSRSTSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFC
KFAAELIERISGKPLMIGTDVSLAWLLRASVVAKSRISFPEKELLLLIRNHLVAKGLHDT
ATTLTKEADLPMACLSHSSHAASAFPPVAPPLPVSPVATLPRTPRLANGVGLRLVNHPSH
SSSPGCSNPQSRPSPSLLNLCSSTALPSPCVPPCTNGSPLIGRIVFSRERLASCTTVSCK
KPRVLRQKSDHGAFSQSPAMKKQFDRHLPSPPALDSIITEYLREQHARCKNPVATCPPFS
LFTPHQCPEPKQRRQAPINCTSRHTRRVIYPKYGGVDGGCFDRHLIFSRFRPISVFREAD
EDESGFMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLL
LTSASWSYPLSALWGMKSVFIMKHSFLGDHYVEFSKLSQDRVIGTKEHIARIYDIQTGQV
TLTLNNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMNISGVFHPNG
LEVIVNTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADDEDDMMEVQMKSPF
GSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQR
LAEEEEEDEEDQEDDDQDEDDDDDDDSDDDIDTDPLIAELDNENGGEDEDDEEEDDGNEE
FSPSDEEVARLLEEDVDVGDDDDEDDNDEEDSDNEDVDLDGDNDSSDNSDLEDDIILSLN
E
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgcacctctgtggctgcgctatggcgtcggcgtctgccagcgtggactccaaggcagag
ctgactgctttactggaacagtgggagagggagcagcaaggcagcacacaggagctggtt
aacatcatcaccaaaatctcagagcttgttgagaaagagacagaggaataccacaaagcg
gaccccgacccttttgatgatcgacaccctgggagagctgatccagaatgtgtgttagga
cacctgctcaagatcctgttcaagaatgatgactttatgaacacactggtgaatagctat
gtgatgaccagcagagaattccccctaaatgcagcagcatgtcgcctgcttcagaacatc
atgcctggattggagacagctgttgtctttcaggaaaaggagggcatagttgagaggctg
tttaaatgggctcaggaggccgagcagccgctcaggatctacgctacgggcttgttggcc
ggtgctatggagaaccaggacatcgcagccaactacagggaggagaactctgttttggtg
cctttgatgctgcatcggttgcgtgagctccaggataaagatgctgagaataaaagggaa
atcaaacggcccagcccctggaagaatttgagtgagcctttgctcactttggatgaggag
actgttgacggaagctttgaagagaagtccttcacaccggggaggaacggggctgaaagg
gaggggacagaggaggatggccaaattgccttctcaaccatcgagcctgaaaacgagctt
tcgttccgactcaactcccctcataagaccagcagtcatgccaactctgctgttaagact
atgatgaagcccatgtctgaccctggttcaatgacataccaaggcatgtcggatggcagc
agcttcctgaaaaggaaggcagatagggagagcggcaggacctcaaaacagaagctaaat
ttctccttgccagacccagacaggaactttagtgagctctccaacagcagctggtcggag
atgagcccctgggtgattggcaacaactatcatctgtaccctctgacccccgaaatcgag
cagaggctaatcctgcagtacctcacccctctgggagaatatcaggagctgctggcggtg
ttcatgcagatgggagctcgtgagctgctcatgcattatatggatctaaagcagaccaat
gatgtgcagctcacctttgaggccctcaagtacctggcttctctgctgctgcacaagaag
tttgctgcagagtttgtggctcatggaggggttcagaagttgttggaaatccccagaccg
tctatggctgctactggagtgtctctgtgcctctactacctagcctataaccaggatgcc
atggaaagggtgtgcatgttgccccactccatcctgtcagatgtggttggttacacgctg
tggctgctggagtgctcacatgcgtccggctgctgccacgccaccatgttcttctccatc
tccttctctttccgtgccgtgctggagctcttcgacaggcaggacggactccgacgcctc
gtcaacctgatcagcacgctggagatcctgaacccggaggaccagggagcgctgctgagt
gatgatgagattttctccagcaggcagacagccaagcacacctgcatggccctgcgcagg
tactttgaggcgcacctggctatcaaggtggagcaggtgaagcaatccctgcagcgcaca
gagggtggagcccccattcactcccaaccatactataaggcggtcagctatacccgagat
caggtggtggaaatgatggagttcttgatagagtacggtcctctcaggctgtactgggaa
ccagcggaggtctttcacaagctctcatgcgtccagctcctcctgcagctcatctccatc
gcctgtgactggagcacgtattatggcaggagcgatacagtgcgttacgctctggacatc
ctgagcatcctcaccgttgttcctaagacgcagatgttgttgtctgaggctgttgctgtg
ctggatgagggaggatccactgtttccactgttggaatgagtatagtcctggcagtagca
gagggagaggtgtttgtaaacgatgccgagattcagaagtccgctctgcaggtcgccatc
aactgcgtgtgtgctccagacaaacgcgtgtccagcattggcaagttcatcgcaggaacc
ccccgccgccgcctgcctcagcagaccaaagccagcgagagtgtgctcactaagatgtgg
aatgtggtgcagtccaacaatggcatcaaggtgctgctgtccctgctgacggtgaagatg
cccatcacggatgcagatcagatccgagcgttggcttgtaaagctctggtgggtctgtct
cgctccacctccgtcagacagatcatcagcaagctgccattgttcagcagcggacacatc
cagcagctcatgaaggagcctgtgctgcaggacaaacgcagcgaacatgtcaagttctgt
aagtttgcagccgagctgatagagaggatctccgggaagccgttgatgatcggtacggac
gtgtctctggcgtggctgctgagggccagtgtggtcgccaagtccaggatctccttccca
gagaaagagctgctgctgctcatcaggaaccacctcgttgccaaaggccttcatgacacc
gccaccacactcaccaaggaggcagatctccccatggcatgtctgtctcattcttcacat
gcagcttctgctttccctcctgtcgcaccccccctacctgtctcccctgttgctactcta
ccccgcaccccacggctggccaacggtgtcgggttaagactcgtaaatcatccctctcat
tcgtcctccccaggatgcagcaatccacaatcacgtccctccccgtcactactcaacttg
tgttcttccactgctctcccctcaccgtgtgtcccgccctgtaccaacggctccccactg
attggtcgaatagttttctctcgggagaggctagcgtcgtgtactacggtgagctgcaag
aaaccccgggtgctgaggcagaagtctgaccatggcgccttcagccagagtccggccatg
aagaagcagtttgacaggcatctgccctccccccctgcactggacagcattatcacagag
tacctgagggaacagcatgcgcgctgtaagaaccctgtggcaacatgcccgcctttctct
ctcttcaccccccatcaatgccccgagcccaaacagagacgccaagcacccatcaactgt
acatcccgacacacgcggcgggttatctatcctaaatacggaggcgtggatggaggctgc
tttgacagacatctcatcttcagcagattccgtcccatctccgtcttcagagaggcggac
gaggatgagagtggattcatgtgttgtgccttctcagctcgcgagcggttcctgatgctg
gggacgtgcacggggcagctcaaactctacaatgtgtttacaggccaggaggaagccagc
tacagctgtcacagttcagccatcactcacctggagccctcacgggatggctctctgctc
ttaacgtcagcctcctggagttaccctctgtccgcgctctggggcatgaaatccgtcttc
atcatgaagcattcttttctgggggaccactatgtggagttcagtaagctttcccaagat
cgtgtcattggtactaaggaacatatagcacggatttacgacatccagacgggacaggtt
actctgactctgaacaacccagacctggctaacaactacaagaggaactgtgccaccttc
aacccaacagacgaccttgtgctgaacgacggcgtgctgtgggacgtgcgctcagctcag
gccatacacaagtttgacaagttcaacatgaacatcagcggtgtgttccatcccaacggc
ctggaggtcatcgtgaacacagagatttgggatctgcggaccttccacctcctccacaca
gtgcccgctctggaccagtgcagaatagtcttcaacaacaacggcaccgtcatctatgga
gcaatgttacaggctgacgatgaagacgacatgatggaggtgcagatgaaaagtccattt
gggtcatcgttcaggacctttaatgccacagactacaaacccatcgccaccattgatgtc
aagaggaacatatttgacctttgcaccgataccaaagactgctacctagctgtgattgag
aaccaagactctgtaaacaccgacaccgtgtgcaggctgtacgaagtcggccggcagaga
ctcgcagaggaagaggaggaggatgaggaggatcaggaggatgacgatcaggatgaagac
gacgatgacgatgacgactcagacgacgacatcgatacagatcctcttatcgccgagcta
gacaatgagaacggtggagaggatgaggacgatgaagaggaggatgatgggaacgaggag
ttctctccctctgatgaagaggtagctcgccttctcgaagaagatgtcgacgttggggac
gacgacgatgaggatgacaatgatgaggaagactctgataatgaagatgttgatctggat
ggcgacaatgacagctccgacaactctgaccttgaggatgacataatcttatccctgaat
gagtga
DBGET
integrated database retrieval system
