Trematomus bernacchii (emerald rockcod): 117479639
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Entry
117479639 CDS
T09643
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117479639 (zeb1b)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
117479639 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
zf-H2C2_5
zf-met
zf-C2H2_6
zf-C2H2_16
Zn_SUZ12
Homeodomain
Motif
Other DBs
NCBI-GeneID:
117479639
NCBI-ProteinID:
XP_033982629
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYSDVVEAGSESDDEDKLHIVEEEGSLADGADCDSTLPE
EEHPRERCWDGVKEDCVSDAEDDGSTDALMEEMLQQGDTAVIYPEAPEDEPQRQGTPDAS
VHDENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEESFNCPECSYSFAYRAQL
ERHMTVHKGGRDQRHITQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKK
RFSHSGSYSSHISSKKCISVISVNGRARLGNAKTQTQAPSPGLPTSPSALRTQMQKMEHS
KPLQEQLPLNQIKTEPVDYEYKPTLMTSAAMAAMNGGVFNGGTASSLQGTVQAVVLPTMG
LMSPISINLADLQNALKVAVDGNVIRQVLESNAKGQLQMHSGLTTGMLHPTQQQLISAIS
LPIVGQDGNTKIIINYSLDPNQGQLTAHNMKKEPEATSLGQKLPEDLTIKGSRLNETKEK
EEKTTKTCLLCDNCPGGLESLHALKHCKDGLRLNGLDKSESAVAALLSEGGLCNQPKNLL
SLLKAVALKAEPTKDELAKISDSVSLPAHVVKKWFDKMQEGQISLGAPTPPSEEEDTCEA
NSVVSLVQGKDTCPSVTQDSPTEATPAEFNGAHSSPASPSPLNLTAGGPVPSQPSQSTEG
PLDLSLPKPAGGGAERAVGKACVNASPSLRSTHVDEPLNLTCTKKEASPLLAMGASHIAL
YASQQSAKPLNIVTTMQCLRALSTNNKQTILIPQLAYTYTTTANSPAGTQTQETLHLNGI
KEEKMDPGSDGMSTVEEQNDSDSGPQRKKMKKTESGMYACDLCDKIFQKSSSLLRHKYEH
TGKRPHECGICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYC
KKETPGQGEGHESPENEAEARAEMEALSRLQQLLAPSQLDLDERGSSTRDEEESEEEDGA
VDMDDIQVVEIGDEGGDEDEEERNEERVLVEGGGDEEKTEMEVAEEEEEEDTRQAEVLGS
IQEEEEVEMQEEEAMDTEEGVTEEGKEEEQVTEESGGEKDSETVSEEQKETPEEEGD
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaacaacgtg
accaactacagtgatgtggtggaagccggctcagaatcagatgatgaagacaagctgcac
attgtggaggaggaaggcagcctggcggacggggccgactgcgacagcaccctgccagaa
gaggagcaccccagggagcgctgctgggacggagtgaaggaggattgtgtgtcggacgct
gaggatgatgggagcacggacgcactaatggaggagatgctccagcaaggagacacggcc
gtcatttacccagaggccccagaggacgagcctcaacgccagggcacccctgacgccagc
gtccacgatgaaaatggaactcctgattccttctctcagctgctcacctgcccatactgc
gcgcgtggctacaagcgttacagctccctgaaggagcacatcaagtaccggcacgagaag
accgaagagagcttcaactgccccgagtgcagctacagcttcgcataccgcgctcagctg
gagaggcatatgacggtccacaagggcggacgggatcagagacacatcacacagtcggga
ggcaatcgtaaattcaagtgcactgaatgtggcaaagcatttaaatacaagcaccacctg
aaggagcacctacgcatccacagcggagagaaaccgtatgagtgctccaactgcaagaag
cgcttctctcactcaggctcatacagctcccacatcagcagtaagaagtgcatcagcgtc
atctcagttaacggcagagcgcgcttggggaacgccaaaacccagacccaggctccatct
ccagggctgcccacgtcaccatcagccctccgcacccagatgcagaagatggagcacagc
aagccactgcaggagcagctgccactcaatcagatcaagactgagcctgtggactatgag
tacaagcccacattgatgacatccgcagcaatggccgctatgaacggtggggttttcaac
ggaggtactgcatcttctctgcagggcacggtgcaggctgtggtccttcccactatgggg
ctgatgtcacccatcagtatcaacctggccgacctgcagaatgctctcaaggtggcggtg
gacggaaatgtcattcgccaggttctggaaagcaatgccaaaggtcagctgcaaatgcac
tcgggactaaccactggaatgctccatcccacacagcagcaactcatctcagccatcagt
ctgcctattgtgggtcaggacggaaacacaaaaatcattataaactacagtttggacccc
aaccagggccagctcacagcccataacatgaagaaagagccagaggcaacctcactaggc
cagaaactcccagaggatctaaccatcaaaggctcccggctcaatgagactaaagaaaaa
gaggaaaagaccactaaaacctgcctcctgtgtgataactgtcccggtgggctggaatca
ctccatgccctcaagcactgcaaggatggcctcaggctgaacggtctagataagtctgag
tctgctgtggctgccttgctgtcagagggcgggctctgtaaccagcccaagaacctcttg
tccctgctcaaggctgtggccttaaaagcagagcccaccaaggatgagctggccaagatc
tctgactcagtcagcctgccagcgcatgtggtaaagaagtggtttgacaaaatgcaagag
ggtcagatatcactgggtgctccaacacctccctcagaggaagaagacacctgtgaagct
aacagtgtggtgtctctggtccaagggaaggacacgtgcccctctgtgacccaggacagc
cctacagaagccactccagcggagttcaacggcgcccacagctcgccggcctctccctca
ccactaaacctgacagctggcggtcccgtcccatcccagccttcccagagcactgaggga
cccctagacctgtcactgccaaagcccgccggagggggagcagagagagcagtgggtaaa
gcctgcgttaacgcctctccttccctccgctctacccatgtggatgaacccctaaactta
acttgcacaaagaaggaggcatcgccactcttagccatgggcgccagccacatcgcactg
tacgccagccagcaaagtgccaaacccctcaacattgttaccacaatgcaatgcctaagg
gcactttccactaacaacaaacagactatcctgatcccccagctggcttacacctatacc
actacagcaaacagccctgctgggacccagacccaggaaaccctccacctcaacggaata
aaggaggagaagatggacccaggctcagatggtatgtccaccgtggaggagcagaacgac
tccgactcgggcccacagaggaagaagatgaagaagacggagagcggcatgtacgcctgt
gacctgtgcgacaagatcttccagaagagcagctcgctgctgagacacaaatacgaacac
acagggaaacgacctcacgagtgcggcatctgcagcaaggccttcaaacacaaacaccac
ttgatcgaacacatgcggctccactcaggggagaaaccctaccagtgcgacaagtgcggc
aagcgcttctcccactcgggatcctactcccagcacatgaaccaccgctactcctactgc
aagaaggagacgccgggtcagggcgagggccacgaaagccccgagaacgaggcggaggcc
agagctgagatggaggcgctgagccggctgcagcagctcctcgccccctcgcagctagac
ttggacgagcgagggagcagcaccagagacgaagaggagagcgaggaggaggacggtgcg
gtggacatggacgacatccaggtggtggagataggggacgaaggaggggatgaggatgag
gaagagaggaatgaggagagagtattagtggagggaggaggagatgaggagaagacagag
atggaggtggcagaggaagaagaggaggaagacacaaggcaggcggaggtgctcgggagc
attcaggaagaggaggaagtcgagatgcaggaagaggaggcgatggatacggaagaaggg
gtgacggaagaggggaaagaagaggagcaggtcacggaggagagtggaggagaaaaagac
agtgagacggtttctgaggagcagaaggagacgccggaggaggaaggagactaa
DBGET
integrated database retrieval system
