Trematomus bernacchii (emerald rockcod): 117479855
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Entry
117479855 CDS
T09643
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117479855
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117479855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
PRY
NOD2_WH
FISNA
LRR_6
PYRIN
SPRY
LRR_4
MatP
7TM_GPCR_Srsx
PatG_D
Motif
Other DBs
NCBI-GeneID:
117479855
NCBI-ProteinID:
XP_033982850
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MATLKEILFSTLEHLGKEDFGKFKWHLQLEVLGFKGIPESRLEDACRTQTVDHMFLNYCI
KTIEVTKYVLKKIHRNDLVDELSKIPSEPTEILTQCQRTLKLNLKIKIEKIIKTGNSRPL
NEIYTEIYITMGETTAEEHEVRQIETASWKPDRPETIIRQEELFKASPGRDAPIRVMTKG
VAGIGKTVLTQKFTLDWAEGKANQDIQFTFPLPFRDLNRLKKNYSLVELVHHFFAETRDA
GICRFDQFSVVFIFDGLDECRLPLDFHNNEILTDVTESTSVDVLLTNLIRGELLPSARLW
ITTRPAAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDQEQAGTIISHIKTSRSLHIM
CHIPIFCWISATVLEKVLKTREGGELPKTLTEMYIHFLVILSKVRNVKYDGKRETDPHWS
PETRKMMEALGKLAFEQLQKGNLIFYDHDLTDCGINITEASVYSGVFTQVFREEGGLYTD
TVFCFVHLSVQEFLAALHVHLTFINSGVNLLAEEPTSFQHSEVKPTLTHLYQSAVDQALQ
SPNGHLDLFLRFLLGLSLQTNQKLLHGLLKETGSGSEINQKTVEYIKKKMDEDLSPERSI
NLFHCLNELNDRSLVKQIQWYLRSGSLSTDKLSPAQWSALVFILLSSEEDLDAFDLKKYS
ASEKALLRLLPVVKASRKALLSGCKLSERSCEVLSSVLSSQSSSLRELDLSNNDLQDSGV
KRLSAGLESPHCELETLSLSGCMVTEEGCVSLASALSSNPSHLRELDLSNNDLQDLGVKR
LSAGLESPHCELETLSLSGCLVTEEGCVSLALALSSDTSHLRELDLSYNHPGDSGEKLLS
AGREDPLWRLETLRLDHGGEQRLKPGVRKYSCGLTLDSNTAQRYLKLSEDNRKVTCGERQ
PYPDHPERFDIWPQLMCREALTGRCYWEVEWRGEVHIAVTYRGISRRGNGEDCGFGFNDQ
SWSLECSDRGYSVRHNKRETSISSSSSSSSRRVAVYLDHPAGSLSFYRVSSDTLTHLHTI
RTTFTKPLYAGFWLWTYDCSVSLCPL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcgacactgaaagagatcctcttcagtactttagaacatttggggaaagaggacttt
ggaaaattcaagtggcacctgcagctggaggtcctaggattcaaaggaatcccggagagt
cgactagaggatgcatgtcggacgcaaactgtggaccatatgtttctgaactactgcatt
aagactattgaagtgaccaaatacgttttgaagaagattcatcggaatgatctggtggac
gaattatcaaaaatcccatcagaaccgacagagattctcactcagtgccaaaggacgctc
aaattaaacctgaagataaaaattgagaaaatcataaaaacgggtaattcaagacctcta
aatgaaatctacacggagatctacatcaccatgggagaaactacagctgaagaacatgag
gtcagacagattgaaacagcatcctggaaaccagacagaccagaaacaatcatcagacaa
gaagaactctttaaagcctcacctggaagagatgcaccaatcagagtgatgacaaagggt
gtggctggcatcgggaaaacagtcttaacacagaagttcactctggactgggctgaaggc
aaagccaaccaggacatccagttcacatttccattacctttcagagatctgaataggctg
aagaaaaattacagcttggtggaacttgttcatcacttcttcgctgaaaccagagacgca
ggaatctgcaggtttgatcagttctcggttgtgttcatctttgacggtctggatgagtgt
cgacttcctctggacttccacaacaatgagatcctgactgatgtcacagagtccacctca
gttgatgtgctgctgacaaacctcatcaggggggagctgcttccctctgctcgcctctgg
ataaccacacgacctgcagcagccaatcagatccctcctgagtgtgtggacatggtgaca
gaggtccgagggttcactgacccacagaaggaggagtacttcaggaagagattcagagat
caggagcaggccggcaccatcatctcccacatcaagacctcacgaagcctccacatcatg
tgccacatcccaatcttctgctggatctctgctacagttctggagaaagtgttgaaaacc
agagagggaggagagctgcccaagaccctgactgagatgtacatccacttcctggtgatt
ctatccaaagtgaggaacgtcaagtatgatggaaaaagggagacagatccacactggagt
ccagagaccaggaagatgatggaggctctgggaaaactggcctttgagcagctgcagaaa
ggcaacctgatcttctatgatcacgacctgacagactgtggcatcaatatcacagaagcc
tcagtgtactcaggagtgttcacacaggtctttagagaggagggtggactgtacacggac
acagtgttctgcttcgtccatctgagcgttcaggagtttctggctgctcttcatgtccat
ctaaccttcatcaactctggagtcaacctgctggcagaagaaccaacatccttccagcat
tctgaagtcaaacctacactaacacatctctaccagagtgctgtggaccaggccttacag
agtccaaacggacacctggacttgttccttcgcttcctcctgggtctttcactgcagacc
aatcagaaactcctacatggcctgctgaaagaaacaggaagtggctcagagatcaatcag
aaaacagttgagtacatcaagaagaagatggatgaagatctgtccccggagagaagcatc
aacctgttccactgtctgaatgaactgaatgatcgttctctagtgaagcagatccaatgg
tacctgagatcaggaagtctctccacagataaactgtctcctgctcagtggtcagctctg
gtcttcatcttactgtcatcagaagaagatctggacgcgtttgacctgaagaaatactct
gcttcagagaaggctcttctgaggctgctgccagtggtcaaagcctccaggaaagctctg
ctgagtggctgtaagctgtcagagagaagctgtgaagttctgtcctcagtcctcagctcc
cagtcctctagtctgagagagctggacctgagtaacaacgacctgcaggattcaggagtg
aagcggctgtctgctggactggagagtcctcactgtgaactggagactctcagtctctca
ggctgtatggttacagaggaaggctgtgtttctctggcttcagctctgagctccaacccc
tcccatctgagagagctggacctgagtaacaacgacctgcaggatttaggagtgaagcgg
ctgtctgctggactggagagtcctcactgtgaactggagactctcagtctctcaggctgt
ctggtcacagaggaaggctgtgtttctctggctttagctctgagctccgacacctcccat
ctgagagagctggacctgagctacaatcatccaggagactcaggagagaagctgctgtct
gctggacgtgaggatccactctggagactggagacactcaggctggaccatggtggagag
cagaggttaaaaccaggtgtgaggaagtattcctgtggactcaccctggactcaaacaca
gcacagagatacctcaaactgtctgaggacaacaggaaggtgacatgtggagagaggcag
ccatatcctgatcatccagagaggtttgacatctggcctcagctgatgtgcagagaagct
ctgactggtcgctgttactgggaggtcgagtggagaggagaggttcatatagcagtgact
tacagaggaatcagcaggagaggaaacggagaggactgtgggtttggattcaatgatcag
tcctggagtctggagtgctctgatagaggttactctgtcaggcacaataagagagaaaca
agcatctcctcctcctcctcctcctcctctcgtagagtagcagtgtatctggatcatcct
gctggctctctctccttctacagagtctcctctgacacactgacccacctccacaccatc
agaaccacattcactaaacctctctacgctgggttctggttatggacatatgactgctca
gtgtctctgtgtcctctgtag
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