Trematomus bernacchii (emerald rockcod): 117479889
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Entry
117479889 CDS
T09643
Name
(RefSeq) cell adhesion molecule 1-like isoform X1
KO
K06781
cell adhesion molecule 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117479889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117479889
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
Nectin family
117479889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_5
C1-set
KOW2_Spt5
Motif
Other DBs
NCBI-GeneID:
117479889
NCBI-ProteinID:
XP_033982890
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MANTGSSSLATILFLFLFQAALLKGAAQEPVVSQNLVTDNVSVVEGEMAIISCRVKNNDD
SVIQLLNPNRQTIYFRDVRPLKDARFQLVNFSGNELKVALSNVSLSDEGRYVCQLYTDPP
QEAYADVTVLVPPGNPIIEARDEVLSEGNETEMTCTAMSSKPAASIRWMKGDKELPGKPK
VELTYDKMYTVTSRLTFTVSKEDDGVPVACIVDHPAVKDFLAQKYLEVQYKPEVKIVVEF
PQGLTREGENLELTCQAKGKPQPQRVNWVKVDDDVPSHAVISGGDLYIENLNKTYNGTYR
CVASNAVGESFDDYILYVYDAPTTTPKPTTASTSTTTISSTISLPEANQDTTPSTEPAAH
DSRAGEGAPRTVDHAVIGGVVAVVVFAMLCLLIVLGRYFARHKGTYFTHEAKGADDAADA
DTAIINAEGGHTNSDEKKEYYI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacactggcagcagctctctggcgactattctctttttattcctgtttcaagcg
gctcttctcaaaggagctgctcaggaaccagtggtgagtcagaacctggtgacggacaat
gtgtcggtggtggagggcgagatggccatcatcagctgtcgagtgaagaacaacgacgac
tccgttatccagctgctcaaccccaacagacagaccatctacttcagggatgtgagacca
ctgaaggacgctcgcttccagctggtgaacttctcgggcaacgagctgaaggtggcgctg
tccaacgtgtcgctgtcggacgaggggcgctacgtctgccagctctacaccgaccccccc
caggaggcctacgctgacgtcaccgtgctggtccctccaggtaaccccatcatcgaggcg
cgtgacgaggttctgagcgagggcaacgagacggagatgacctgcaccgccatgagcagc
aagcctgccgccagcatcagatggatgaagggagataaagagctgccaggtaagcccaaa
gtggagctgacctacgacaagatgtacaccgtgaccagccggctgaccttcaccgtcagt
aaggaggacgacggcgtgccggtggcgtgcatcgtggaccaccctgccgtgaaggacttc
cttgcacagaaatacctcgaggttcagtacaaaccggaggtgaagatcgtggtagagttt
cctcagggtctgacgagggaaggagagaacctggaactcacgtgtcaggccaaaggcaaa
ccccagcctcagcgggtgaactgggtgaaggtggatgacgacgtgccgtcccacgcagtc
atctccggaggcgatctttacatcgaaaacctaaacaagacctacaacggcacctaccgc
tgcgtggcctccaacgcggtgggggagtccttcgacgactacatcctctacgtatatgat
gctcccaccactacccctaaacccaccaccgcctccacctccaccaccaccatctcctcc
accatctccctccccgaggccaaccaagacactacgcccagcactgaacctgcagctcat
gactcccgggctggagagggcgctccgaggacggtggaccacgcggtgatcgggggggtc
gtggccgtggtggtgttcgccatgctctgtctactcatcgtgcttggacgctacttcgca
agacacaaaggtacctacttcacacatgaagccaaaggagcagacgacgccgcggacgca
gacacagccatcatcaacgcagagggggggcacaccaactcggacgaaaagaaggaatac
tacatctaa
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