Trematomus bernacchii (emerald rockcod): 117480031 Help Entry 117480031         CDS       T09643                                  Name (RefSeq) cysteine protease ATG4D-like   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism tben  Trematomus bernacchii (emerald rockcod) Pathway tben04136   Autophagy - other tben04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:tben00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     117480031    04136 Autophagy - other     117480031  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:tben01002]     117480031   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tben04131]     117480031    03029 Mitochondrial biogenesis [BR:tben03029]     117480031 Peptidases and inhibitors [BR:tben01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    117480031 Membrane trafficking [BR:tben04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     117480031 Mitochondrial biogenesis [BR:tben03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     117480031 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 Motif Other DBs NCBI-GeneID:  117480031 NCBI-ProteinID:  XP_033983077 LinkDB All DBs Position Unknown AA seq 453 aa AA seqDB search MNPSTSSQPPEEEEGDWLFLSSESAQPPGPSREPQETEDRGPLRSRFISAWNSVKYGWSL KQKSKFSKRSPVIMFGQSYELKDHGDRECFRRVFSSLLWLTYRRGFSPLPGGALTSDSGW GCVLRTGQMLLARGLLLHLMPPGWTWCVSHHAVKDDLELLRSTESAESGQQVKEGPTKRS RKLSLGSLLDRPMEATHRRVVSWFTDHPSAPFGIHQLVELGKSSGKKAGDWYGPSIAAHI LRKAVAASTDIPNLVVYVAQDCTVYLEDVRRLCERHPPQAWRSVIILVPVRLGGQELNRS YISCVKKLLTLQCCIGIIGGKPKHSLFFTGFQDDHLLYLDPHYCQLTVDITKENFPLESF HCKYPRKMSFSRMDPSCTIGFYAKGHRDFESLCTAVNEALTTSASTYPIFIFAEGRSQEE EERSKMPTNNMAYIQRNKGMKSVSNSMDEFVLL NT seq 1362 nt NT seq  +upstreamnt  +downstreamnt atgaaccccagcacctcctcccagcctcctgaggaagaggagggcgactggctcttcctc tcctctgaatccgcccagcctccaggacccagccgggaaccgcaggagacggaggaccga ggaccactcagatccaggttcatctcagcctggaacagcgtcaaatatggttggtccttg aagcagaaatcgaagttcagtaagaggtctcctgtcatcatgttcggacaatcctacgag ctcaaggatcacggggacagggaatgtttccgccgcgtcttctcctccctcctgtggctg acgtacagacggggtttctctccgctgcccggcggcgctctgacctcagacagcggctgg gggtgtgtgttacgcaccgggcagatgctgctggcccgaggcctgctgctgcacctcatg cccccaggctggacttggtgtgtgagccaccatgcggtcaaagacgacctggagctgctc cgctccacagaaagtgcagagagcggacagcaagtgaaggaaggacccaccaagaggagc aggaagctgagcctgggctccctgctggaccgacccatggaggccactcacaggcgggtg gtgtcctggttcacagaccacccctctgctccgtttgggattcaccagctggtagagtta gggaaaagctctgggaagaaggccggggactggtacggtccgtccatcgctgctcacatc ctccggaaagcagtggcagcatcaacagatattcccaatctagtcgtgtatgtcgcacaa gattgtactgtctacctggaggatgtgaggaggctgtgtgagcgccacccccctcaggcc tggaggtccgtcatcatcctggtacccgttcgcctcggaggacaagagctgaaccgctcc tacatctcatgtgtcaaaaaactgttgacattacaatgctgcattgggatcatcggggga aaaccaaagcactcgttattcttcactggattccaggacgaccacctgctgtacctggac cctcactactgtcagctcactgtggacatcacaaaggagaacttccccctggagtcgttt cactgtaaatatccgaggaagatgtctttctctcgaatggaccccagctgcaccatcggc ttctacgctaaaggccacagagactttgagtcactctgcaccgccgttaacgaggctctc accacatcagcatcgacgtaccccatttttatttttgcagaaggcagaagtcaagaggag gaggagagaagcaaaatgccaacaaacaacatggcgtacatccagaggaacaaaggcatg aagagtgtgagcaacagcatggatgagtttgttctgttatga

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