Trematomus bernacchii (emerald rockcod): 117480112
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Entry
117480112 CDS
T09643
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00900
Terpenoid backbone biosynthesis
tben01100
Metabolic pathways
Module
tben_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117480112 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tben01006
]
117480112 (fdps)
Enzymes [BR:
tben01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
117480112 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
117480112 (fdps)
Prenyltransferases [BR:
tben01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
117480112 (fdps)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
117480112
NCBI-ProteinID:
XP_033983186
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MRRLRSLVINAPQIFRTMWREVSPFKLKTTSALLCTSSIQGDSICNGTHSSKKALLSDPQ
LFEAQFDELVTELSERDLSDPALADALSRLREVLVYNSPGGKRNRGLSVIGSLRELLPPT
ELTQETVQRALVVGWCIELLQAFFLVADDMMDGSVTRRGQPCWYKKDGIGLEAINDSFLL
EATIYRLLRRHCREQPYYVHLLELFTETSFQTELGQALDLMTAPPGQIDLSRFTMARYKA
IVKYKTAFYSFYLPVAASMYMAGIESEEEHNNAKHILLEMGEFFQIQDDYLDCYGDPAVT
GKIGTDIQDNKCSWLVVTALEIMTAEQRAELEACYAQHDDACVEQVKALYNTLQMPALYH
KYEEESYQRLQKLIACHAQNLPHSVFLNFAKKIYKRNK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtctgcgtagcttggtcattaatgcccctcaaatattccgcacaatgtggcgc
gaggtctctccgttcaaattaaaaaccacatctgctttgctgtgcacctcgtctatccag
ggagacagcatttgcaatgggacgcacagcagcaaaaaggcgttgctgtcggaccctcaa
ttgtttgaagcccagtttgacgagctggtgacggagctttcagagagggacttatccgac
ccggcgctggctgacgcactcagcaggttaagagaggttttggtgtacaactcccctgga
ggcaagaggaaccgaggcctgtccgtgattggctcactgagggagctactcccgcccact
gagctcacacaggagaccgtgcagagggccctggttgtgggatggtgcattgagttgctt
caggcatttttcctggtggcagatgatatgatggatggatctgtaactcggagaggacaa
ccctgctggtacaaaaaggatgggattggtctggaagccatcaatgattcgtttctcttg
gaagcgacgatctacagacttctgcgcagacattgccgggagcagccctactacgtccac
ttactggagctatttactgagacctctttccagaccgagctcggtcaagctctggacctc
atgacggccccccctggtcagattgacctcagcagatttacaatggcaagatacaaagct
attgtaaaatacaagacggccttttactcattttatctcccagtagcagcttcaatgtac
atggcaggaattgagagtgaggaggaacacaataatgccaaacacatcttacttgaaatg
ggagagttctttcaaatacaggatgactacttggactgttacggagaccctgctgtgacc
ggaaagattggtactgacatccaggataataaatgcagctggctggtggtgacggccctg
gaaataatgactgccgaacagagagcagagctcgaggcatgttacgcgcaacatgatgat
gcctgtgtggagcaggtcaaagctctgtacaacaccctgcaaatgccagctttgtaccac
aaatatgaggaagagagctaccagcggctacagaaactcatcgcgtgtcacgctcaaaac
cttccccactcagtcttcctcaactttgctaagaaaatatacaagaggaacaagtga
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