Trematomus bernacchii (emerald rockcod): 117480131
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Entry
117480131 CDS
T09643
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117480131 (irx1a)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117480131 (irx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
117480131
NCBI-ProteinID:
XP_033983207
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYASERPGVLTSSSRGGSTELGGSPSATAAAVNSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKDNPGVHPGSFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGSRSKEDGEDGNLFGSGDEAEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDKSTEG
SRDHRGALGAGGDLDSLEKRRAFALQAHEAFEKSKIPLSVHPGSKENSDGNNNTTRVLSP
DRPGSFPLPSNNKPKIWSLAETATSPDSSSQKPTSPCGPAATTHPSAAHHQIQTHPAFLP
SHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHHHNHHLQAQQQQQPTSVVVS
PVAAAAALSNDSKARAETHSPKHIEHENGARSVSPPTQILKSSFRPIHDRSSLPSSARSP
QDATQRVLTALSSA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctaggctacccgcagtacttgagtgcctcccaggcggtgtacgcg
agcgagagaccgggagtgcttacgtcttcgtcccggggagggagcaccgaactcggggga
agtccgtccgccaccgcagcagcggtcaactcggtgttaggcatgtacgccaacccgtac
gcacacaactacagcgctttcttaccttacaccagcgcggacttggctcttttctcacaa
atgggatcccaatacgagctcaaggataatccaggcgtccatcctggcagcttcgcagcc
cacacatccccggccttctacccgtatggccagtttcagtacggtgatccggccaggccc
aagaacgcaacccgggagagcaccagcaccctgaaggcctggctcaacgagcaccggaag
aacccgtaccccaccaagggggagaagatcatgctggccatcatcaccaaaatgacgctg
acgcaggtctccacatggttcgccaacgcacggaggaggctcaagaaggagaacaaggtg
acgtgggggagcaggagcaaagaggacggcgaggacggtaacttgttcggtagtggggac
gaagcggagaaaaacgaagacgaggaggagattgatttggagagcatagacatagacaaa
atcgacgacaacgacggggatcagagcaacgaggatgatgatgataaatcaacggagggc
agcagggaccacaggggcgcactcggtgccgggggagacttggacagcttggagaaaaga
cgggcctttgccctgcaggcccatgaggcttttgaaaaatctaagatcccactttcagtt
cacccagggagtaaggagaactcggacggcaacaacaacaccacaagagttttgtccccg
gatagacccgggagctttcctctcccctctaacaataaacccaaaatatggtctttagca
gaaacagccactagtcctgatagttcttctcagaaacccacgtccccgtgtggccccgcg
gccacaactcacccatctgcggcccaccaccagatacagacccaccctgccttcctcccc
agtcatggactgtacacctgccagattggaaagttccacaactggacgaatggcgctttc
ctgggccagaactccctgctcaatgtgaggtcgtttctgggagtaaaccagcaccatcac
caccacaaccaccacttgcaggcccagcagcagcagcagccgacatcagtagttgtgtcg
ccggtagcagctgcagcagcactcagcaatgacagcaaggcccgagcagagacgcacagt
cccaaacacatagagcatgaaaacggtgcaaggtctgtttcacctccaacacagatcctg
aagtcttcctttcgacccatccatgacagatcctctctgccttccagcgccaggagtcca
caagacgccacgcaacgagtcctcactgctctctcctcggcttga
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