Trematomus bernacchii (emerald rockcod): 117480145
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Entry
117480145 CDS
T09643
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117480145 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117480145 (prpf3)
Spliceosome [BR:
tben03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117480145 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
117480145
NCBI-ProteinID:
XP_033983225
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTIDQLRPFLDDSAG
GFVERLFEALEESRSARGHKGSGEKHRKRDLKDVFGDESEPVAVRETPEIVDVPAPKRKR
VPRFEEVEEPEVIPAPPAESPGMLTKMQIKQMMEAATKQIEERKKQLSFTSPIPVAHQME
IPPVSRLLGNSAAAAGGGGSSIAPSQAASFMNDAIEKARKAAELQARIQSQLAMKPGILG
ALGNTGAHNMVALANLHAMGIAPPKVEIKEINKPTPLILDDLGRTVDASGKEIELTHRMP
TLKANIRAVKREQFRQQLKEKPGEDLESTSYFDQRVNITPAIRARRGFKFHDQGRFEKIA
QRIRTKAQLERLQNEIAQAAKKTGIQASTKLALIAPRKDMGIGEVPNIEWWDSYITPNNV
DISSDTAFEEMELFGVTNLVEHPAQINSPVDTDKSVTLGVYLTKKEQKKLRRQTRREGQK
EVQEKVRLGLMPPPEPKVRISNLMRVLGMEAVQDPTKVEAHVRAQMAKRQKAHEDANSAR
KLTSEQRKEKTVKRLKEDLTDGVHIAVYRIRYLQNPAKKFKVEANANQLYLTGTVVLHRD
VNLVVVEGGPKSQKKFKRLMMHRIKWVEHNSKREGLDGDDDAKRNNKCWLIWEGTAKERN
FKGEMKFKQCPTENMAREHFKKHGTEQYWDLALSQSVLDGTDD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcccaagcgggaggtggaggagctgaggccatgggtggagcggactgtgaag
aaggtgcttggtttctcagagcccacagtggttactgctgctttgcactgtgttggaaag
ggactcgacaaacgaaagaccatagaccagctgcgccccttccttgatgactcggccgga
ggttttgtggagcgtctttttgaagctttggaggaaagccgcagtgcacgtggccacaaa
ggatcaggagaaaaacaccgcaagagagacctcaaggatgtatttggtgatgaatctgag
ccggttgcagtgcgagaaactccagagatagtagatgtgccagctccaaagaggaaacgc
gtcccccgcttcgaggaggtggaggagcccgaggtcattcctgcacctccagccgagagc
ccgggcatgctcaccaagatgcagattaaacagatgatggaagcagccacaaaacagatt
gaggagaggaagaaacagctgagctttacctctccaatcccagttgcacatcagatggaa
atccctccagtctctcggcttctcggcaactctgctgctgcagctggaggcgggggctca
tccatcgccccctcccaggctgccagcttcatgaatgacgccatcgagaaggcccgcaag
gctgctgagctccaggcccgcatccagtcccagttggccatgaaacctggtatcctcgga
gccctgggtaacactggcgctcacaacatggtggcactagctaatcttcatgccatggga
attgccccaccaaaagtagaaatcaaggagataaacaagccaacacctcttattcttgac
gacctgggaagaactgtggatgctagtggcaaagagattgaactcacacaccgcatgcct
actttgaaagcaaacattcgagctgtaaagagggagcagttccgtcagcagctgaaggag
aagcctggggaggatttggagtcaacgtcctattttgaccagcgtgtcaatattacaccg
gctattcgtgctcgaaggggcttcaaattccatgaccaggggcgcttcgagaagattgct
cagagaataagaactaaggcccagttggaaaggttgcagaatgagattgcccaggcagca
aagaagactggaatccaggcatccaccaagctggcactaatcgcccccaggaaagacatg
ggaatcggagaggtgcccaacatcgagtggtgggactcctacatcacgcccaacaatgta
gacatatcatccgacacagcatttgaagagatggagctcttcggtgtgaccaatcttgta
gagcatcctgcccaaattaactctccagttgatacagataagtcggtaacgttgggagtt
tacctcacaaagaaagaacagaagaaactgagaagacagacacgaagggagggacaaaaa
gaagttcaagagaaggttcgtctggggctgatgcctccaccagaaccaaaagtgcgcatc
tccaacctgatgagagtgctggggatggaggcagtccaggatcccacgaaggttgaagcc
cacgtcagagcgcagatggccaagagacaaaaggctcacgaggatgccaactcagcccga
aagctcacatcagagcagaggaaagagaagacggtcaagaggttaaaagaagacctcact
gatggtgttcacattgcagtgtacaggatccgttacctgcaaaatcctgccaagaagttt
aaagtggaggccaacgccaaccagctgtacctgacaggcacagtggttctgcacagagac
gtcaatctggtcgtggtggaaggaggccctaaatcccagaaaaagttcaagaggctgatg
atgcacagaatcaaatgggtggagcacaacagtaaaagagaaggacttgatggtgatgat
gatgcaaaaagaaacaacaagtgctggttgatttgggaaggcacagctaaagagcgcaac
tttaagggggagatgaagttcaagcagtgcccgacagagaacatggccagagaacacttc
aagaaacacggcacagaacagtactgggatctcgctctcagccagagtgtgttggacggc
acagacgactga
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