Trematomus bernacchii (emerald rockcod): 117480156
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Entry
117480156 CDS
T09643
Symbol
efl1
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117480156 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tben03009
]
117480156 (efl1)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
Pre-60S particles
GTPases
117480156 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
ARM_LRRK2
Motif
Other DBs
NCBI-GeneID:
117480156
NCBI-ProteinID:
XP_033983243
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MAPTSLDRIVALQRNPANIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHHRNGDQDYLLNLIDSPGHVDFSSEVSTAVRLCDGAIVVVDAV
EGVCPQTQVVLRQAWLENIRPVLVINKIDRLILELKLSSQEAFIHLQKILEQVNAVTGSL
FTSKVLEERAEKEKEKEEEDEKNEKEVETLTGDQLYDWSAGLEEADDSQLYFSPHQGNVV
FASAIDGWGFSIQQFAHIYSQKMGIKAEVLLKTLWGDYYLNAKAKRIMKGAQAKGKKPLF
VQLVLDNIWSLYDAVVTRRDKDKVEKVVSSLGVKVMSRDSRHSDPKVLLSAICSQWLPVS
QAVLAMVCEKLPSPLDITEERVEKLMSVGARIFDSLPEQTQELKRAFLRCGSEEDDPLII
FVSKMFVVDNKALPKNRQRPLTHEEIAQRRDLARQRHAEKLAADQTAAENPSAPPISGSM
PQEGQPAEVSTAKMESLTLKDSKPQEEEEQQTFVAFARIYSGVVKKGQRVFVLGPKYDPA
KGLSMLPGGCMASDCVPEVPHMSCCSMENLYLLMGRDLEELQQVPAGNVLGIGGLEECVL
KSATLSTSPACPPFIPLNMEAMPIVRVAIEPKHPSDMPKLVRGMRLLNQADPCAEVLIQE
TGEHVLVTAGEVHLQRCLDDLRERFAKIEISASKPIIPFRETVVRPPKVDMVNEELGHQH
KVAIHRVKEEASQGRSSDTLHVDPSGLVTLTTPNRLASVSVRAAPLPQDVTSLLESSTEL
IRTLEQVNMSLREGRSVDVSPRTLEAIAGFKAQLESLLQGRRWRSAVEHIWAFGPRRYGP
NILLNSVEGYQRPSVWQCLCRGGPPEAGAQTAFTRDLDNSIVSGFQLATLSGPMCEEPLM
GVCFSLERWDVQSSAPPQHQDSVEEASISHEAPADCKVEGSSETPAKTEGPVSGPSQARR
RPEAPPPGCYGPVSGQLIAAMKEACRHAFQAQPQRLMAAMYTCEIMATAEVLGRVYGVLG
KREGRVLHEEMKEGTDMFLIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVISSDP
YWVPTTEEEYLHFGEKADSANQALKYTNAVRRRKGLYVEEKTVEHAEKQRTLGKNK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaccagcctggacaggatcgtcgctttgcagaggaaccctgcgaacatccgg
aacctgtgcatcctggcccatgtggaccatggtaaaaccactctggctgactgcttggtg
gcgagtaacggaatcatatccagtcgactggccggcaagctgaggtatctggacagcaga
gaggatgaacagatcagaggaatcaccatgaagtccagtgccatctctctgcaccacagg
aacggagatcaggactacttgctgaacctgatcgactctcctggtcacgtggacttctcc
tcagaagtgtccactgctgtccggctgtgtgacggggccatcgtggtggtggatgctgtg
gagggagtgtgtccacagacccaggtggtgctgcgtcaggcctggctggagaacatcagg
cccgttctggtcatcaataagatcgaccgcctcatcctggagctgaagctgtcctctcag
gaagctttcatccacctgcagaagatcctggaacaggtgaacgcagtgacagggtctttg
ttcacatccaaagtgctggaggagcgagcggagaaagagaaggagaaagaggaggaggat
gagaagaatgagaaggaggtggagacgctgactggagatcagttgtatgactggagcgcc
gggctggaggaggcggatgactcccagctctacttttctcctcaccaaggaaacgtggtg
tttgccagcgccatcgatgggtggggcttcagcatccagcagtttgcccacatctacagc
cagaaaatgggtattaaagccgaggtgctgctcaaaaccctgtggggggactactacctc
aacgctaaagcaaagaggatcatgaaaggagctcaggccaaagggaagaagcctctgttt
gtgcagctggtgctggacaacatttggagtttgtatgatgctgtggtcaccaggagagac
aaggacaaggtggagaaggtggtgtcctctctgggggtgaaggtgatgtccagggactcc
cggcactctgaccccaaagtcctgctgtctgccatctgcagccagtggttacctgtgtcc
caggctgtcctcgcaatggtgtgtgagaagctccccagtcccttagacatcactgaggag
cgggtggagaaactgatgagtgtcggagcgcggatatttgactctctgcccgagcagacg
caagaactgaaaagagcgttcctccggtgtggaagtgaggaggatgatccactcatcatc
tttgtgtccaagatgttcgttgtggacaacaaggccttgcctaagaacagacaaaggccg
ttgacacacgaggagattgcacagcgcagagatctggcgagacagagacatgctgaaaaa
ctggcagctgatcagacggcagcagagaacccctcagccccccccatctcagggagcatg
ccacaggaaggccagcctgcagaagtcagcacagccaagatggagagtttgaccctgaag
gactcaaagccacaggaggaagaggagcagcagaccttcgtggcgtttgcacggatctac
agcggggtggtgaagaaaggacagagagtgttcgtgctgggaccgaagtacgaccccgcc
aagggcctgagcatgctgccggggggctgcatggcctcagactgtgttcctgaggtccct
cacatgagctgctgctccatggagaacctgtacctgctgatgggccgagacctggaggag
ctgcagcaggtgcctgccgggaacgtgctgggtatcggaggtctggaggagtgcgtcttg
aagtcagccaccctgtccacctcccctgcctgtccccccttcatccctctcaacatggag
gccatgcccatcgtacgggtggccatagagcccaaacaccccagtgacatgccaaagctg
gtgcgtgggatgcgtctgttgaaccaggctgacccctgtgctgaggttctgatccaggag
acaggggaacatgttctggtcactgctggggaggttcacctgcagcgctgcctggacgac
ctcagagaacggtttgctaaaattgagatcagcgcgtccaagcccatcattcccttcaga
gaaacagtggtgcggcccccgaaagtggacatggtgaatgaagagctgggccatcagcac
aaagtggccatccaccgggtgaaagaagaggcctctcagggacgttcctctgacacgctc
catgtggatcccagtggtctggtgaccctaaccacccccaaccggctggcctccgtcagc
gtgcgggccgcccccctgccccaggatgtgacgtctctgttggagagcagcacggagctc
atccgtactctggagcaggtgaacatgtccctgagggaggggaggagtgtggacgtcagc
ccccggactctggaggccatcgctgggttcaaagcccagctggagagcctgctgcagggc
cggaggtggaggagcgctgtggagcacatctgggccttcggaccccgcagatatggtccc
aacatcctgctaaacagtgtggagggctaccagcggccctccgtgtggcagtgtctgtgt
cggggcggcccccctgaggccggagctcagaccgccttcactcgagatttagacaacagc
atcgtcagcggcttccaactcgcaaccctgtcagggcccatgtgtgaggagccgctgatg
ggggtctgcttctccctggagaggtgggacgtccagtcctcagcccccccacaacatcaa
gactccgtggaggaggcctccatatcccatgaggctccagctgactgtaaagtggagggg
agcagtgagacccccgccaagacggagggcccggtgtcagggcccagccaggccaggcgc
agaccggaggcccccccccccggctgctacgggccggtgtccggtcagctgatcgccgcc
atgaaggaagcgtgccgccacgccttccaggcccagccgcagagactcatggccgccatg
tacacctgtgagatcatggccaccgccgaggtgctgggcagggtgtacggggtgctgggg
aagcgtgagggccgagtcctgcatgaggagatgaaggaggggacggacatgttcctcatc
aaggccgtgctgcccgtcgctgagagcttcggattcgctgacgagatccgcaagaggacc
agcggattggccagcccacagctggtcttcagccactgggaggtgatcagcagcgatccg
tactgggttcccaccacagaagaagagtacctgcacttcggggagaaagcagactctgct
aaccaggccctgaagtacaccaacgctgtgcgccgccgcaagggcctctacgtggaggag
aagaccgtggagcacgcagagaagcagagaactctgggcaagaacaagtag
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