Trematomus bernacchii (emerald rockcod): 117480158
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Entry
117480158 CDS
T09643
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117480158 (irx2a)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117480158 (irx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
117480158
NCBI-ProteinID:
XP_033983242
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRNEDLARSSSGSAFSPYPGSAAFSASAGA
GFSSPLSYSTDPTTGFPSYMSSPYDAHTSGMAGALSYHPYGSPGYPYQLNDPAYRKNATR
DATATMKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR
NKSEDEDEEDGDGERKEVDRSEKTLDNSEASAEDEGISLHVDILTDHSCSAESDGEKVSC
RGGELGSDRAGDKCEEDGEEQNHDRRAQLSPISVTSSPLTGVEAPLLSHHHHHLHHLHQL
HSQREDLARSLININTINTNKSSPCLDSRPSSGAPQNPTVKPKLWSLAEIATSDQKQHHQ
QHVQPGQPNCPSSSGGLLTPPTSSTTSPAASSPSLYPAPSILGRPIYYTSPFYSNYTNYG
NFSPLQGQGILRYTNSSGVSLAAAAAVAAANEGLSSSHHAVEASTNPKHRPDSPLVKNNP
NHIVVVEPQQLFRPAHLEAKKGT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctctctggctctttattcgtgt
ccagcatacggggcctcggctctggctgccccgcggaatgaagacttggcgagatcgtcc
tctggctcagccttcagtccttaccctggatcggctgctttctccgcctcggccggtgca
ggcttctccagcccgctgtcatactccacggatccaactacgggattcccatcctacatg
agctctccatatgacgcgcacacatcgggcatggccggggcattgagttaccacccatac
gggagtccagggtacccctaccaactcaacgacccggcttaccgcaaaaacgcaaccagg
gacgccacggccaccatgaaggcctggctgcaggagcaccggaagaacccgtacccgact
aaaggggagaagatcatgctggccatcatcaccaagatgaccctgacgcaggtctccaca
tggttcgccaacgccaggcggaggctcaagaaggagaacaagatgacatgggcgcccagg
aataagagcgaagacgaggacgaggaggacggggacggagagaggaaagaagtggatcgc
tctgaaaaaacgctggataacagcgaggcttcagcggaggatgaaggtatcagcttgcac
gtcgacattctgacggaccactcgtgctctgcagagtctgacggggagaaggtcagctgt
cgtgggggggaactgggctctgaccgggccggcgacaagtgcgaggaggacggcgaggag
cagaaccacgacaggcgggctcagctttcacccatatccgtcacatcgtcgcctctcacg
ggagtagaagctccactcctcagtcatcaccaccaccacctccatcatctccaccaactc
cacagtcagcgcgaggatttggcccgcagcctcatcaatatcaacactatcaacaccaat
aaatcgtctccttgccttgatagcagaccttcttcgggggcgcctcagaaccccacagtc
aagcccaaattatggtcgctggcggaaattgctacctcggaccaaaagcagcatcaccag
caacatgtgcagcccggacaaccgaactgcccctcctccagcggtggcctccttaccccc
cctacgtcttccaccacctccccggctgccagttccccctccctctacccagccccctcc
atccttggaagacctatttattacacttctcccttttatagcaattacacaaactatggc
aacttcagccccctgcagggccaagggatcctgcggtatactaattcatccggagtgagt
ctggctgctgccgccgccgtcgctgctgcaaacgagggtctgagctcctctcaccacgct
gtggaggccagcactaaccccaaacacaggccagactcccccctcgttaaaaataaccca
aaccacattgttgttgtcgagccacaacagcttttccgacccgcacatttagaagcaaag
aaaggtacgtaa
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