Trematomus bernacchii (emerald rockcod): 117480200
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Entry
117480200 CDS
T09643
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117480200
03037 Cilium and associated proteins [BR:
tben03037
]
117480200
Transporters [BR:
tben02000
]
Other transporters
Pores ion channels [TC:
1
]
117480200
Cilium and associated proteins [BR:
tben03037
]
Other cilia and associated proteins
Stereociliary proteins
117480200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF4744
Orf78
Motif
Other DBs
NCBI-GeneID:
117480200
NCBI-ProteinID:
XP_033983314
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MSTVSESVVGSTRSLSAAKRHKSIRKNSRRIYSAYQDNQGSSDDQDKEDERADSNDPEEM
FQNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGYQTAGADLLKKLS
RVLYNILVLFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELLA
GAPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGRLRKIGSAGYRLPLAY
FLVGMAVFAYSFVVLLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAESKGA
AIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQE
KPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSL
IIALLDKVNSMSSAIPLSPGNWSESSSFLATISQPEGNSLSTLVSEISVSEHRNITIATI
ATIATVLDVRNTSTSGSGVISNQTSLFEKNIRSQQDPCWETYVGQEMLKLSIIDMIFTVA
SILLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCL
PAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYVAMLLFMLFLCMLPTIFAIVR
YRPSQHCGPFSGQEKIYDIISETVANDFPLWFSKVMSYVTSPVVVLPALLLLFMLIYYLQ
AIARSLKFTNNQLRMQLQTERTEDKKKVFQLAAARLQAPEADKKPDQQESDVTSQEVSIH
TPSPRRNGSITDFNSPVHRGNSIRTITQSASRAELSRGGVAGSVRSPAVTILPKHRPPEH
TPSRPPPFLGGPSGSCRSKSYHHMACSPPARYSDHIQSDPLYRKTLRSIHPMEAAGIISA
QSYGGRRGHTTRYVIVNEHDPRKKLLRSATRIPRHFLMEEPAEILELYPRNIKRYAPRSA
HHQPHPHRSHPSQQHLSEEEEEEEDGKGKRRISLGKAHRPRSLSDLHQPAHFYIGDRGER
HGSKDSRGRYGVHEEDEEEDGEEEIDWGDLEPHSRSQSSVRGADSVLVRNRRHIHSPGRP
CPSPVRSRPMESHVKPKTRPKLEPPLTESDSASLASSSDQQNSSTDQYIQVIHNKDHYLK
SEARQGKQAKKKSKTSFDLNVTESKDLVYSNV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagtgtctgagtcagtggtgggcagcaccaggtctctgtccgcagccaagaga
cacaaaagtatcaggaagaactccaggaggatttattctgcctaccaggacaaccagggc
tcctcagatgatcaggacaaagaggatgagcgggcggacagcaacgacccggaggagatg
ttccagaacattcagtaccagaaggagatcatcgccaacatccggaccagaccctggcca
atgagacgcaagctcaaagtccttaagcaggccagagagatcgttctgaagtacgagggc
cgcctgaccagaacccgagggtaccagactgcaggagctgacctgctgaagaaactttca
cgtgtactttacaacattttggttctgttcattccctgggaagttaggattaagaaaatc
gaaagccactttgggtcgggcgtggcctcctacttcattttcctccgctggctgttcggg
atcaacatcgtcctcaccatcatgaccggagccttcatcgtgctgccagagctgctggct
ggagctccgtttggaacaacgaggagtaaaactatccccaaggagcatctggcttcagcc
caagacctggacaccatctggtctctcgggggctacctgcagtactccgtgttattctat
ggttactatggcagactgaggaagattggcagtgcggggtaccggttgcccctcgcctac
ttcctggttgggatggcggtctttgcctacagtttcgtcgtcctgttaagaaaaatggct
aagaactctcgtctgagcctggccagcgcctccgatgagaacttcacgttctgctggagg
gtgttctgtgcctgggactacctgatcgggaaccctgaggctgcagagagcaaaggagcc
gccatcgtcaacaacatccgggaagccattgttgaggagcaggaaaagaagaaggatacc
agtctggcagttctgatcagtctgcggatcctcgccaacatcctggtccttctgtctctg
gccggcagcatctacatcatctactttgtggtggaccgctctcagaaactggagcaggag
aagccggagctgacgctgtgggagaagaacgaggtgagtgtggtggtgtctctcatcacg
atgatcgctccgtctgcctttgagctggtggctcagctggagatgtaccacccccgaacc
tcgctgcgcttccagctggccagagtgctagttttatacctggggaatctctacagcctc
atcattgccctccttgataaggtcaacagtatgagctctgctatcccgctgagtccaggg
aactggtctgagtccagctccttcctggccaccatctctcagccggaggggaacagcctc
tccaccctggtctctgagatctccgtctctgaacatcgcaacatcaccatagcaaccata
gcaaccattgccacggtgctggatgttaggaacactagcaccagcggctcaggggtcatc
tccaaccagacgtctctgtttgagaagaacatccgctctcagcaggacccctgctgggag
acctatgttggacaggagatgctgaagctgtccatcatcgacatgatcttcacggtggcc
agcatcctgctcattgacttcatcagaggtctggtggtccgctacctcagtgactgctgc
tgctgggatttagagagcaagtttcctgaatatggagagttcaaaatagcagagaatgtt
ttgcatctgatttataaccaagggatgatctggatgggagcatttttctccccctgtctc
cctgcctttaacgtgttgaagctgattggtctgatgtatctgaggagctgggccgtgctc
acctgcaatgtcccccaccagcaggtgttccgagcctccagatcaaacaatttctacgtg
gccatgctgctgttcatgctgtttctgtgtatgctgcccaccatctttgccatagtgagg
tacagaccgtcccagcactgcggaccattcagtggtcaagagaagatttatgacataatc
tctgagacggtggccaatgacttcccgctgtggttcagtaaagtgatgagttacgtcacc
agccctgttgtagtgctgcctgcactgctgctgctgttcatgctgatatattatctccag
gccatagccagatccctcaaattcaccaacaaccagctgaggatgcagctgcagacggaa
cggaccgaggacaagaagaaggtcttccagttggctgcagcgagactgcaggctccagag
gccgacaagaagccggatcagcaggagagcgacgtcaccagccaggaggtctccatccac
actccatcaccccggcggaacggcagcatcacagactttaactctcctgttcaccgtggt
aacagcatccgcaccatcacccagtcagcgtcccgggcggagctgagcagagggggtgtg
gcggggtccgtccggagtccagcagtcaccatcctgcccaaacacagaccgccggagcac
acccccagcaggcccccaccctttcttggtggtcctagtggttcctgcaggtccaagtcc
taccaccacatggcctgcagtcccccagctcgctattctgaccacatccaatctgacccc
ctgtacaggaagaccctccgctccatacatccgatggaggcggcaggcatcatctcagct
cagagttatggggggcggcgcggccacaccacccgctacgtgatcgtcaacgaacacgac
cccaggaagaagctgctgcgctcggccacacggatccctcgccacttcctcatggaggag
cccgcagagatcctggagctttacccgcgcaacatcaaacgctacgccccccgcagcgct
caccaccaaccacaccctcaccgctcacacccatcacagcagcatctcagtgaagaggag
gaagaggaggaggatgggaaaggaaaaagaaggatatcgttggggaaggctcatcggccc
agatccctctctgacctgcaccagcctgcacacttctacatcggggaccgcggggagaga
cacgggtctaaagacagccgaggaagatatggagtgcatgaagaggatgaagaggaggat
ggtgaggaagaaatagactggggagatttagagccacactcccggtctcagagcagtgtg
agaggagcagactctgttctggtgcgaaacaggcgtcacatccactccccaggaagaccc
tgtccctccccggtcaggagcaggcccatggagtctcatgtgaaacccaagaccagaccg
aagctggagccccctctgaccgagtcggactcggcctcgctggcctccagcagcgaccag
cagaacagcagcactgaccagtacatccaggtcatccacaacaaggaccactatctcaag
tcagaggccaggcagggaaagcaggccaaaaagaagtccaaaaccagctttgatctgaat
gtcactgagtcaaaggacctggtctattccaatgtatga
DBGET
integrated database retrieval system
