Trematomus bernacchii (emerald rockcod): 117480296
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Entry
117480296 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: heat shock cognate 71 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03040
Spliceosome
tben04010
MAPK signaling pathway
tben04141
Protein processing in endoplasmic reticulum
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117480296
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117480296
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117480296
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117480296
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117480296
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117480296
03009 Ribosome biogenesis [BR:
tben03009
]
117480296
03110 Chaperones and folding catalysts [BR:
tben03110
]
117480296
04131 Membrane trafficking [BR:
tben04131
]
117480296
03051 Proteasome [BR:
tben03051
]
117480296
03029 Mitochondrial biogenesis [BR:
tben03029
]
117480296
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117480296
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
117480296
Spliceosome [BR:
tben03041
]
Complex B
Other components
Prp19 complex
117480296
Complex C
Prp19-CDC5 complex
117480296
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
117480296
Chaperones and folding catalysts [BR:
tben03110
]
Heat shock proteins
HSP70 / DNAK
117480296
Membrane trafficking [BR:
tben04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
117480296
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
117480296
Proteasome [BR:
tben03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
117480296
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
117480296
Exosome [BR:
tben04147
]
Exosomal proteins
Proteins found in most exosomes
117480296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FGGY_C
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
117480296
NCBI-ProteinID:
XP_033983474
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MSKGPAIGIDLGTTYSCVGIFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
MNPTNTVFDAKRLIGRKFDDPVVQSDMKYWPFKVVNDATKPKMEVEYKGEIKSFFPEEVS
SMVLTKMKEISEAYLGKAVNNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA
IAYGLDKKVGGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
FIAEFKRKFKKEINDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGADFYTSITRA
RFEELNADLFRGTLEPVEKALRDAKMDKGQIHDIVLVGGSTRIPKIQKLLQDLFNGRELN
KSINPDEAVAYGASVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTI
PTKQTQTFTTYSDNQPGVLIQVFEGERAMTKDNNILGKFELTGIPPSPRGVPQIEVTFDI
DANGILNVSAVDKSTGKENKITITNDKGRLSKEDIEQMVQEAEQFKAEDEIQREKVTAKN
SLESLAFNMKSTVEDEKLQDKISPEDKKTIVEKCNEVIAWLDRNQTAEKDEYDHQQKELE
KVCNPIISKLYQDGMPGGMPGGMPGGMPGGMPGGMPGGMPGGMPGGFPGGAGGGSSSGPT
IEEVD
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggaccagcaattggcattgatctgggcaccacatattcctgtgtgggcatc
ttccagcatggcaaagtggagatcattgctaatgaccaaggaaacaggaccacacccagc
tatgtggccttcacagacactgagaggctgattggagatgccgcgaagaaccaggtggcc
atgaacccaaccaacactgtatttgatgctaagcgcctgatcggtcgtaagtttgacgat
cctgtagtgcagtcagatatgaagtactggcccttcaaggttgtgaatgatgcaaccaag
cccaagatggaggttgaatacaagggggagatcaagagcttcttccccgaggaggtttcc
tcgatggtcctcaccaagatgaaggagatctctgaggcttatctcggcaaggccgtgaat
aatgcagttatcacagttcctgcttacttcaatgactcccagcgtcaagccaccaaagat
gctgggaccattgctggcctgaatgtgctgcgcatcatcaatgaacccactgctgcagct
attgcttatggcctggacaaaaaggttggcggtgaacgtaatgtccttatctttgacctt
ggaggtggtacttttgatgtgtcaatcctgaccattgaggatggcatctttgaggtcaag
tccacagccggtgacactcacttgggtggtgaggacttcgacaaccgcatggttaaccac
ttcattgctgagttcaagcgcaagttcaaaaaagaaatcaacgacaacaagcgagctgtg
cgtcgtctgcgcacagcctgcgagcgtgccaagcgcaccctgtccagcagcactcaggcc
agcattgagatcgattccctctatgaaggagcagatttctacacttccatcaccagagcc
cgttttgaagagctcaacgcagacctgttccgtggaaccctcgagcccgtggaaaaggcc
ctgagggatgccaagatggacaagggacagatccatgacattgtcctggtgggtggctcc
actcgtatacccaagattcaaaagctgctgcaggatcttttcaatggacgtgaactgaat
aagagcatcaacccggatgaggctgtggcttatggtgcatctgtgcaagcagccattttg
tctggtgataagtctgagaatgtacaggacctgctcctgctggatgtcacacccctgtcc
ctgggaattgagaccgctggaggagtaatgactgtccttatcaaaaggaacaccactatc
cccaccaagcaaacccagacctttaccacctattcagacaatcagcctggtgtacttatt
caggtttttgaaggtgagagagccatgaccaaggacaataacatcttgggcaagtttgag
ctgaccggtattccaccttctcccagaggagtccctcagattgaagtgacctttgacatt
gatgccaatggcattctaaatgtgtctgcggtggacaaaagcactggaaaagagaacaag
atcaccatcaccaatgacaaagggcggttgagcaaggaggacattgagcaaatggtgcag
gaggctgagcagttcaaggctgaggacgagatacagagagaaaaggtcacagccaagaac
tcactcgagtctctggccttcaacatgaagagcaccgtggaggacgagaagctccaagac
aagatcagccctgaggacaaaaagaccatcgtagaaaagtgcaacgaagtcattgcctgg
ctcgacagaaatcagacggcagagaaggatgagtacgatcatcagcagaaggaactagaa
aaggtgtgcaaccccatcatctccaagctataccaggatgggatgccaggtgggatgcca
ggagggatgccaggtgggatgccaggagggatgccaggtgggatgcctggaggaatgcca
ggaggaatgcctggaggtttccctggtggagctggaggcggctcctcctctggccctacc
atcgaggaggtcgactaa
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integrated database retrieval system
