Trematomus bernacchii (emerald rockcod): 117480357
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Entry
117480357 CDS
T09643
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117480357 (wdtc1)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117480357 (wdtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_RFWD3
TPR_19
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
TPR_2
ANAPC3
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_SPT8
TPR_1
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_RIG_2nd
TPR_17
Beta-prop_WDR19_1st
TPR_6
Beta-prop_IFT140_1st
TPR_16
Barstar
TPR_9
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
117480357
NCBI-ProteinID:
XP_033983543
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MFCGINMTAVNITRDILHRQIRDKRAPAFQRSYHVTDPFIKRLGLEAELQGHTGCVNCLE
WNESGDLLASGSDDQHAIVWDPFKHKKLTTMHTGHAANIFSVKFLPHSGDRILITGAADT
KVHVHDLSVKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGIIRQYDLRENSKRSEVL
IDLTEFCGQLVEAKCLAVNPRDNNYMAVGANGPFVRLYDIRMINNYRKSMNQGTSAAVHT
FSEKPIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFD
LTFKQRPYTFLIPKKCQSSTGDVQNGKTTNGVSNGIVLPTSHIRFSGSTTGSSSTELPAY
LEKIKQQANDAFARQQWTQAIQLYSLGIHQASCNAMLYGNRAAAYMKRKWDGDHYDALKD
CLKALSLNPTHLKAHFRLARCLFELKYVSEAMECLDDFKGKFPDQAHSSACDSLDKDIKA
ALFTKTETAEDKKANSSIRFHSFSRKESIPEDELVLRERSFDYKHRYCGHCNTTTDIKEA
NFFGSKGQYIVSGSDDGSFFIWEKETTNLVRILQGDESIVNCLQPHPSYCFLATSGIDPV
VRLWSPRAETETENGRVVEDMESAAQANQRRMNADPLEVMLLNMGYRITGLRGVGPDGSD
DEDSSDGQVQCRPS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtggtatcaacatgactgctgtcaacatcaccagagacatcctgcacaggcag
atcagagacaagagagcaccagccttccagaggtcctatcatgtgaccgaccctttcatc
aaaagacttgggctggaggccgagcttcagggtcacactggctgtgtgaactgcctggaa
tggaatgaaagtggagatttactggcctcgggctcggatgatcaacatgccatcgtctgg
gatccattcaaacacaagaagcttaccaccatgcacacaggtcatgcagcaaatattttc
tctgtaaagttcctccctcactccggggacaggatcttgataacaggcgcagccgacaca
aaggtccatgtgcatgacctgtctgtgaaggagaccatccatatgttttctgatcacacc
aacagagtcaaacgcattgccacagcccccatgtggcccaacaccttctggagcgctgcg
gaggatggcatcatcaggcagtacgacttgagggagaacagtaagcgctcagaggtgctg
attgacctcacggagttctgtggtcagctggtcgaggccaagtgtctcgcagtcaaccca
cgggacaacaactacatggcagtgggcgccaatgggccttttgttcgcctttatgacatc
aggatgattaacaactacaggaaatctatgaatcagggcacatcagcagctgtgcacaca
ttcagtgagaaacccatcccagacggagctgggcagtattacgttgcaggtcacttgcca
gtgaaactcccagactacaacaatcgcctgagagtcttggtggccacctatgtcaccttc
agtcctgatggcactgagctactggttaacatgggtggtgaacaggtgtatctgtttgac
ttgacatttaaacagaggccatacaccttcttgattccaaagaagtgccagtcatcaaca
ggagatgtacagaatggaaagacaaccaatggcgtctcaaatggaattgtcttgccaacc
agccatattcgattttccggaagcacgacgggctctagttctactgagctccctgcttac
ttggaaaagataaagcaacaagctaatgatgcgtttgcacggcagcagtggacgcaggcc
atccagctgtacagtttaggcattcatcaggccagctgcaacgccatgctgtacgggaac
cgggcagcagcatacatgaaacgcaagtgggacggagaccattatgatgccctcaaggac
tgcctgaaggctctgtctctgaaccccactcacctaaaggctcatttcaggctggcacgc
tgtctgtttgagctgaagtacgtgtctgaagctatggagtgtctggatgatttcaaaggg
aaatttccagatcaggcccacagtagtgcttgtgattccttggataaagatatcaaggct
gctctcttcaccaagacagaaacagctgaagataagaaggccaacagctccattcgattc
cactcattcagtcggaaagagtccatccctgaagacgagttggtgctgagagaacgcagc
tttgactacaagcacagatactgcggccactgcaacaccaccactgatatcaaagaggcc
aacttctttggaagcaaaggccagtacattgtcagcggctcagacgacggctccttcttt
atctgggaaaaggagacgactaacctggtgaggatcctgcagggggatgagtccatagtg
aactgcctgcagccccaccccagctactgcttcctggccacgagcggtatcgaccctgtg
gttcgattatggagcccaagagctgagacagagactgagaacgggcgggtggtggaggac
atggagagtgctgctcaggcgaatcagcggcgcatgaacgctgacccgctggaggtcatg
ctgctcaacatgggctatcgcatcacaggcctgcgtggcgtcggtccggatggctccgat
gatgaagacagctctgacggacaagttcagtgtcggccaagctaa
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