Trematomus bernacchii (emerald rockcod): 117480408
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Entry
117480408 CDS
T09643
Symbol
ptprub
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117480408 (ptprub)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117480408 (ptprub)
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117480408 (ptprub)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
Ig_DSCAM-DSCAML_C
ig
Y_phosphatase3
Pur_ac_phosph_N
Ig_3
PTPlike_phytase
Ig_2
PTP_tm
I-set
Motif
Other DBs
NCBI-GeneID:
117480408
NCBI-ProteinID:
XP_033983613
LinkDB
All DBs
Position
Unknown
AA seq
1435 aa
AA seq
DB search
MNTCAFLLILTVQIYADGIEGPTAAGCTFEEDSDPSLCDFTQGEEDDFDWLLFRTYSSPY
ASPDLLRGSYMLVNSSQHAVGHRAQLMLQTLSENDTHCVQFSYFLYSRDGHSPGGLRAYV
RVNGGPLGSSVWNTSGSHAKQWHQVELAVSTFWPNEYQVLIEATVSRERRGYIAIDDIMV
LNYPCYKAPHFSRLGDEEVNAGQNATFQCVASGRAAEAEKFLLERHTGDILTTASVKHLS
HRRFVVSFQLDSVQRTDQDLYRCVTQSPRGSGVSNFAELVVKVPPSPIAPPQLLRAGSTY
LIIQLNTNSILGDGPIIRKEIEYRASQSPWSEVHGVNMVTYKLWHLEPDTEYHISVLLTR
PGEGGTGPPGPPLVSRTKCAEPMRALRGLTAADMQSRQLSLQWENLAFNLTRCHTYSVSL
CYRYTTAGGGGGHNTTVRECLAVEHNASRFTLRDLPPYHGIHVRLSLANPEGKKEGREVT
FQTEEDIPGGIAPESLTFTPLDDMIFLKWEEPVEPNGLITQYEISYQSIESSDPGINVPG
PRRTVSKMKNETYHMFSNLHPGTTYLISVRARTIKGFGQTALTEITTNISAPTFDYGDMP
SPLSETESTITVLLRPAQGRGAPVSTYQVVVEEEMVKKVKRELGLQECFPLPMSHGEAQA
RGTPHYYTAELPPSSIPEASPFTVGDNHTYNGYWNSPLDPRKSYLVYFQAMSNFRGESRI
NCIRIARKAACKDHRKALEVSQHSEEMGLILGVCAGGLVVLILLLGAVIIIIKKGKPVNM
NKTPITYRQEKSHMGSMERSFTDQSTLQEDERMALSFMDAHTCGTRSDVRSSVNEASSLL
GGSPRHQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFDGWDCTKK
KDKTKGRHDTLSGYDRHRVKLHPLLGDPNSDYINANYIDGYHRSNHFIATQGPKQETLYD
FWRMVWQENCFSIVMITKLVEVGRVKCSKYWPDDSEMYGDIKITLLKTETLAEYTVRTFA
LERRGYSTKHEVRQFHFTSWPEHGVPYHATGLLAFIRRVKASTPPDAGPVVVHCSVGAGR
TGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFIHDAILEACLCGETA
ILVNEFAVTYKEMLRVDSQSNSSQLREEFQTLNSVTPHLDVEECSIALLPRNREKNRSMD
VLPPDRALAFLVTTEGESNNYINAALADSFHRQAAFIVTPHPLPGTTADFWRLVFDYGCT
AVVMLNQLNQSNSAWPCVQYWPEPGLQQYGPMEVEFLSMSADEDVITRLFRVKNVTRLQE
GQLVVCQFQFLRWSAYRDVPDSKKAFLNLLAQVHKWQRECGEGRTVVHCLNGGGRSGTLC
ASNILLEMIQYQNMVDIFYAVKTLRNCKPNMVESLDQYRFCYDLVLEYLDCFEGR
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgcgcctttctgttgattttgactgttcagatctacgccgatggcatcgag
gggccaacagcggccggctgcacgttcgaagaggactcagaccccagtctgtgtgacttc
acccagggggaggaggacgactttgattggctgctgtttcggacgtacagttcaccttat
gccagccctgacctcctgcgaggatcctacatgctggtgaactcctcccagcatgccgtg
ggtcatcgtgctcagctgatgctgcagacgctgagtgaaaatgacacgcactgcgtccag
ttcagctacttcctgtacagccgcgatggccacagtccagggggcctgcgggcgtatgtc
cgagtgaacgggggtccgctcggcagttcggtgtggaacacgtcggggtctcatgctaag
cagtggcaccaggtggagctggctgtcagcaccttctggccgaatgaataccaggtactg
attgaggcaaccgtttccagagagcggcgaggctacattgccatagatgacatcatggtg
ctcaactacccctgctataaggcgccgcacttctccaggctaggagatgaggaggtcaat
gctgggcaaaacgctactttccagtgtgttgcttctggaagagcagctgaggctgagaag
ttcctgctggagagacacactggggacattttaacaacagcatcagtcaagcacctgagt
caccggcgctttgtggtatccttccagctagacagcgtccagcgaacagatcaagacctt
taccgctgcgtcacccagtctcccaggggctctggggtgtcaaactttgctgaacttgtt
gttaaagtacctccatcccccattgcgccaccccagctgctgcgagccggctccacttac
ctaatcatccagctcaacaccaactctatcctgggagatggccccattatcaggaaggag
attgagtaccgcgccagccagtctccatggtcagaggtgcacggagtcaacatggtcacc
tataagctgtggcacctggagccagacacagagtatcacatcagtgtgctgctgactcgg
cccggggagggagggaccggccccccaggaccgcctcttgtgagcaggaccaaatgtgca
gagcctatgcgtgcacttcggggcctcacggccgcagatatgcagtccaggcagttgtcc
ctgcagtgggagaatttggcgttcaacctgacacgctgccacacatactcagtgtccctg
tgctaccgctacaccacggcggggggtggagggggccacaacaccacggtgcgcgagtgc
ctggcagtggaacacaatgcctcacgcttcacgctgcgtgatctgccaccctaccacggc
atccatgtccgcctgtcactggccaacccagaggggaagaaagagggcagagaggtcacc
ttccagaccgaggaggacattcccggaggaatcgcgccagagtcgctcaccttcaccccg
ctggatgacatgatcttcctaaagtgggaggagcctgtggagcccaatggccttataacc
caatatgagataagttaccagagcatcgaatcgtctgatcctggcatcaacgtcccggga
cccagaagaactgtgtccaagatgaagaatgagacctaccacatgttctccaacctccac
ccgggaaccacttacctcatttcagttcgagcccgcacaatcaagggctttgggcagacc
gccctcactgaaatcaccaccaacatctcagctcccacgtttgactacggagacatgccg
tcccccctgagcgagacagagagcaccattactgtcctgctgcgcccagcccaaggcaga
ggagcccctgtcagcacataccaggtggttgttgaagaggaaatggtgaagaaagtaaag
agggagctggggcttcaggagtgttttccactgccgatgtcccatggggaggcgcaggcc
cgaggcactcctcactactacacagccgagctgccgcccagcagcatcccagaggccagt
cccttcactgtgggcgacaatcacacctacaacggctactggaacagtcctttggacccc
cgcaagagctaccttgtctacttccaggctatgagcaacttcagaggggaatcaagaata
aactgcatccgcatcgctcgcaaagcagcctgcaaggatcaccgcaaagctctggaggtg
tcccagcactcggaggagatgggtctgattctcggggtgtgcgctggaggcctggtggtg
ctcatccttctgctgggtgccgttattatcatcattaagaaagggaaaccagtgaacatg
aataagacacccattacctaccggcaggagaagagccatatgggctccatggagcgcagt
ttcacagaccagagcactctgcaggaggatgaaaggatggccctttccttcatggatgcg
cacacctgcggcacacgcagtgacgtccgtagttcagtgaacgaggccagcagcctgctg
gggggctccccgaggcaccagtgtggacgtaaaggctccccataccacacagggcagctc
caccccgccgtcagagtggctgaccttctgcagcatatcaaccagatgaagactgccgag
ggctatggctttaaacaggagtatgagagcttctttgatggatgggactgcacaaagaag
aaggacaaaaccaaagggaggcatgacacactgtcaggatatgaccgccacagagtcaag
ctccaccctctcctgggagaccccaactcagactacattaacgctaactacattgatggc
taccatcgatccaaccacttcatcgccactcagggacccaagcaggagactctctatgat
ttttggcggatggtgtggcaggaaaattgtttcagcatcgtcatgatcactaagctggtg
gaggttggcagggtgaaatgctctaaatactggcctgatgacagcgagatgtatggtgac
atcaaaatcacccttcttaagacggagacactggctgaatacacagttcgcacctttgcc
ttggagaggagaggatactcaaccaagcatgaggtgcgtcagttccacttcacatcctgg
ccggagcacggagtgccctatcatgccactggactgttggcctttatacggagagtgaaa
gcctctactcctcctgacgccggccctgtggtggtccactgcagcgtgggggcgggccgc
accggctgctacatcgtgctggacgtcatgttggacatggccgagtgtgaaggcgtggtg
gatatctacaactgtgtcaaaaccctctgctccagacgcatcaacatgatccagacagag
gagcagtacatcttcatccatgatgctattttggaagcctgtctgtgcggggagacggcc
atcttggtaaatgagtttgcggttacttacaaagagatgctgcgagtcgattcccagagt
aattcctctcagctacgggaggagtttcagacgctcaactctgtgactccccacctggat
gtggaagagtgcagcatcgctctgttgcccagaaaccgagagaagaatcgcagcatggat
gttctgccgcctgatcgcgccctggccttcttggttacgactgaaggggagagcaacaat
tacatcaacgctgctctcgctgacagcttccatcggcaggctgcgttcattgtgacccct
caccctctgccggggaccacagcggacttttggaggctggtcttcgactacggctgcacg
gcagtggtcatgctcaaccaactcaaccagtcaaactctgcctggccgtgtgttcagtac
tggccggagcccgggctacagcagtacgggcccatggaggtggagtttctgtccatgtct
gctgacgaagatgtcatcactcgtctgtttcgggtcaagaatgtcacacggctccaagag
ggccagctagtggtgtgtcagttccagttcctgcgctggtcggcgtatcgagatgttccc
gactccaagaaggctttcctcaacctcctggctcaagtgcacaaatggcagagggagtgt
ggagaaggtcgcactgttgtccactgccttaacggtggtggtcgcagtgggaccctctgt
gccagcaacattctccttgagatgatccagtaccagaacatggtggacatcttctatgcg
gtcaaaactctacgcaactgcaaacccaatatggtggagtccctggaccagtatcgattc
tgctatgaccttgtcctggagtacttggactgctttgaagggagatag
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