Trematomus bernacchii (emerald rockcod): 117480422
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Entry
117480422 CDS
T09643
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117480422 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117480422 (prpf31)
Spliceosome [BR:
tben03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117480422 (prpf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
7TM_GPCR_Sra
Motif
Other DBs
NCBI-GeneID:
117480422
NCBI-ProteinID:
XP_033983632
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MSLADELLADLEEAGDEGEEGLYPEEEERDSDGEATQGRAEGALEDIPEEMEVDYSKAES
VGSIAKLRNSKQFSEIMEKISFYSGKQRKNSEISGLVESDPEYRLIVAANNLTVEIDNEL
NIIHKFTRDKYSKRFPELESLVPDSLDYVRTVKELGNNLEKCKTNETLQTILTNATIMVV
SVTASTTQGILLSDDELQQLEESCDMSLELSQSKLRIYEYVESKMSFIAPNLSVIVGAST
AAKIMGIGGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDL
RRKAARLVSAKCTLASRVDSFHESSDGKVGYDLKEEIERKFDKWQEPPPVKMVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNEATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGISSSVAFTPLQGLEIVNPGA
AEKKVAEANQKYFSNMAEFLKVKKESKM
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcggacgagctcctggccgatttggaggaggccggagatgagggggaggag
gggttgtatccagaggaagaggaacgggatagtgatggagaggcaacgcagggaagggca
gagggagcgttggaagacatcccagaggagatggaggttgactacagtaaagcggagagt
gttggctccatcgccaagctgcgcaatagcaagcagttttcagagatcatggagaaaatt
tccttttatagtggaaagcagcgcaagaactcagagatctctggtctagtggagtcagac
ccagagtacagactgatcgttgcagccaataatctcacagtggagatcgacaacgagctc
aatatcattcacaagttcactcgggacaaatactccaagaggtttccagagctcgagtct
ctcgtgccagattctctagattacgtccgcacagtcaaggaattgggaaataatctggag
aagtgcaagaccaatgaaactctgcagacaatcctcaccaacgccactatcatggtggtc
agtgtcacagcctcgaccacacaggggatactccttagtgacgatgaactgcagcaactg
gaggaatcgtgtgacatgtctctggagctgagccagtccaaactcaggatctatgaatat
gtggagtccaaaatgtcattcatcgccccaaatctgtccgtcattgtcggagcgtcaaca
gctgccaagatcatgggtattggaggcggcctgactaacctctccaagatgcccgcctgt
aacctgatgctgctgggcgctcagaggaggacgctgtctggcttcagcagcacctccctg
ctgccccacaccggctacatctaccactgtgatgtggtgcagtcactgccacccgacctc
aggaggaaggccgctcgtctggtgtctgctaaatgcaccctggcttcccgagtggacagc
ttccacgagagttcagacggcaaggttggctacgatctcaaagaagaaatagagaggaag
tttgataaatggcaggagcctccgccagtgaagatggtcaaaccgctgccagccccgctg
gacggacagaggaagaagagaggaggaaggaggtatcgaaagatgaaggagcgtctcgga
ctgactgagatcaggaagcatgctaacaggatgacctttgcagagattgaggatgatgcc
taccaagaggacctgggcttcagtctgggtcagttggggaagagcggcagcgggcgcgtc
cggcaggctcaggtcaacgaggccaccaaggccaggatctccaaatccctccagaggacg
ttgcagaagcagagcatgacgtacggaggaaagtccaccgtcagagaccgctcctcaggg
atcagctccagtgtggcgttcactcctctccaggggctggagatcgtgaacccaggggct
gcggagaagaaggtggctgaagcaaaccagaagtacttctctaacatggcggagttcctc
aaagtcaagaaggaatcaaagatgtga
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