Trematomus bernacchii (emerald rockcod): 117480423
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Entry
117480423 CDS
T09643
Symbol
ube3d
Name
(RefSeq) E3 ubiquitin-protein ligase E3D isoform X1
KO
K20803
ubiquitin-protein ligase E3 D [EC:
2.3.2.26
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117480423 (ube3d)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117480423 (ube3d)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
HECT type E3
117480423 (ube3d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT_2
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
117480423
NCBI-ProteinID:
XP_033983633
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MADFEMASRTHGVGVFLELRKRLQSGLLIVGKDVARSPADVVVSGEYSSLLVFTPRGELS
LTLPAGVTYEPGSCFPTPAGESCGEELHFRLRINVKPSTEEEASDNVMETLRAEETYCFH
CQGCMTRLLEDRVFKRVLPLPNGNWNSIVDDWCCHPDPFAKKLLPRAEDCLLGDTFLLLA
RDSSCEHTLTVEEAPVDSEDGQDSKESCRRVALVSCKSCSSVLGEAVAPGTVKLYITQVV
VERAEGDREPETSLNRSLFLEKTIAARLLGLSSSMSTFHFSVQTPDGKTYLLLWLLNSDS
ITASVPETCVREESSVDSPSPHSPSPAAATVLKLLYTSCSDTSTQHRDIADSWEANAIGH
AVVLPLKVCEELLQVIEDSNSTLPASMRRMRSYEVAYLRL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttgagatggcatccagaacacatggagtaggagtcttcttagagctgagg
aaaaggctccagagtggactgcttatcgtcgggaaagatgtggccagaagtcctgcagac
gtggtggtgtcgggtgaatattcttctctcctcgtgttcactcccagaggcgagctgagc
ctcactctgcctgcaggcgtcacctacgagccaggatcctgcttcccaacacccgcggga
gaatcctgcggagaggagctgcatttcaggctgcgcatcaatgtcaagccgagcacggag
gaagaggcttctgacaacgtgatggagacactccgggccgaagagacttattgcttccac
tgccagggctgcatgaccaggctgctggaggacagagtgttcaagcgagttcttcctctc
cctaacggcaactggaactccatcgtggacgactggtgctgccaccccgaccccttcgct
aagaagctgctgccccgagccgaggactgtctgctgggagacaccttcctcctcctcgcc
agagacagcagctgtgaacacaccctcactgtggaagaggcacctgttgactcagaggac
gggcaagattcaaaggagtcctgccgccgagtggcactcgtctcctgcaagagctgctca
tcagtgctgggagaggctgtagcaccagggacggtgaaactgtacatcacacaggtggtg
gtggagcgagcagaaggagaccgagagccagaaacttcacttaacaggtcgctgttcctg
gagaagaccatcgcagcccggctgttggggctgtcctcctcgatgagcaccttccacttc
tccgtccagactcctgatggaaaaacctacttattgctctggctcctgaacagcgactcc
atcacagcgtcggtcccggagacgtgtgtgagggaggagagctctgttgactccccctct
cctcacagtccatcacctgcagctgccacagtcctgaaactcctctacacctcctgctca
gacacaagcacccagcacagagacattgcagatagttgggaggccaacgccattggacat
gctgtggtgctgccgctgaaggtgtgtgaggagctgctgcaagtgatagaggacagcaac
tctacacttcctgcgtcgatgcgtcgcatgaggtcctatgaggtggcatacctgagactg
tga
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