Trematomus bernacchii (emerald rockcod): 117480456
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Entry
117480456 CDS
T09643
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117480456 (sntb1)
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117480456
NCBI-ProteinID:
XP_033983677
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MAVVIETGVSGASGVQKSGFVEVLVRERWHKVLVNLNEEALTLSCEEGCVNDNGDDNVNS
NGVTNGSYLDNNNTNSNNGPQTVRTAFTDLPERVPEAIANRKRCVKLTKQEIGGLGISIK
GGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGMNLRDATHDEAVQALKRAGREVT
LEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGSHSLTSCSPFDPPSSPTQPSLSLQG
DRRCIPLRMCCVTRAMTTPDPENRQLELHSPDARHTVVLRCPDQPSALSWFSAMHSVTST
LSQRALAEVIQNTARTGVAGSREIRHLGWLAGKTESEKQSWKPVLVVVTEKDLLLYESLP
RGKEAWQSPAHTYPLLATRLVHSGPDRGSPHSGTELFFATRTGTRLGIETHLFRAETTKD
LSLWTRQIVNGCHASAEMIKEVTTSCLYQSQECRLVIHYEQGFSVLADPSLGEGGDGEER
GAHTPTRPRVLLSYPYEKLKMSSDDGVRLLFLDFGGKEGAIQLDLHSCPKPMVFILHSFL
SAKISRLGLVA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtaatcgagacgggagtttcaggtgcctccggagtgcaaaaaagtggattt
gtggaggttttggtgcgggagcggtggcacaaagttttggtcaacttaaacgaggaagcg
cttacgttaagctgcgaggagggctgcgtaaacgacaacggggacgacaatgtcaactcc
aacggggttaccaacggatcctacctggacaacaataacaccaactccaacaacggcccc
caaactgtgcgcaccgcgttcacggacctgccggagcgagtgcccgaggcgatcgccaac
agaaagcggtgcgtcaagctgaccaagcaggagatagggggactggggatcagcatcaag
ggcgggaaggagaataaaatgcccattctcatcagtaagatattcaaagggctcgcagcg
gatcagacccaggctctgtacgtgggggacgccatcctgtccgtgaacggcatgaacctg
cgggacgcgacccacgacgaggctgtgcaggcgctgaaacgggccgggagagaggtgaca
ctggaagtgaagtacatgcgtgaggccacgccgtacgtcaaaaagggctcccctgtgtcg
gagatcggctgggaaaccccccctcctgagtctcctcgcctcggcagccactccctcacc
tcctgctcccccttcgaccccccaagctctcccacccagccttcactgtccctgcagggc
gacaggaggtgcataccactcaggatgtgttgtgtaacccgagccatgaccacacctgac
ccagagaacagacagctggagctgcactcccctgacgcccggcacaccgtggtgcttcgc
tgccccgaccaaccctcggccctgagctggttctccgccatgcactctgtcacctccact
ctgtcacagcgggcgctggcagaggtcatccagaacacagccaggaccggggtggctggc
agccgagagatacgacacctgggctggctggcagggaagacggagagcgagaagcagagc
tggaagccggtgctggtggtggtgacagagaaagacctgctgctgtacgagagcttaccg
cgaggcaaggaggcctggcagagccctgctcacacctacccactgttagcaacacgtttg
gtccactctggtcctgaccgggggtcgccgcactctggcaccgagttgttcttcgccact
cggactggcacacggctcggtatcgagactcacctgttccgggccgagaccaccaaggat
ctgtccctgtggaccagacaaatagtcaacggatgtcacgcctcagccgagatgatcaaa
gaggtcacgacaagttgtctgtaccagagtcaggagtgccggctggtgattcactatgag
cagggcttctctgtgctggctgacccctcactgggggaggggggggacggggaggagaga
ggagcccacacacctaccaggccccgggtgctcctctcctacccctacgagaaactaaaa
atgtcctcagatgatggagttcgcttgctctttcttgactttggaggaaaggagggagcg
atacagctggatctccactcatgtccgaagccgatggtcttcatcctccactccttcctc
tctgctaagatctcccgcctgggtctggtggcctga
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