Trematomus bernacchii (emerald rockcod): 117480553
Help
Entry
117480553 CDS
T09643
Symbol
rbm12bb
Name
(RefSeq) RNA binding motif protein 12Bb
KO
K24526
RNA-binding protein 12
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117480553 (rbm12bb)
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117480553 (rbm12bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF1151
Motif
Other DBs
NCBI-GeneID:
117480553
NCBI-ProteinID:
XP_033983784
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MAVVIRLQGLRVSAGSEDIRKFFTGLKIPDGGVHIIGGEQEEAFVIFASDEDARRAMIRS
GGCIKGSPVALLLSSKSEMQNLLERSTRDVELDQKRRLEEKARHTRRPLDPEGGRRSASR
SDYNPPPQHQRASNTNDDLHVFLKGMPFSVTEGEVRDFFCDLLIDEIFLLKNANGSKNGK
GFVKFAAREDANEALKRDRQYIGSRYVEVSSTTEDDWRRATGKVSMAVNKHDNFERERSP
IRHQRNPHYVRSESPLAQRPVAPSDEEYCVLIENLSYSVEKEDIKKLFRNAKLEDDQILH
LIGSDGKRTRSAFVLFKNLHDYCDALTNEKRSLWNRFIHTRPISREKMISLLQSQSMDGG
PPGNSATFQDSPPSFPSDPYDSEKMCLFVRNLPFDVRKVEIMDFFLGFNITEDMAFVLRD
HTGAGVGKALVLFRSEAEAMNALSLNGQRFLGSEVILKCISRSQMRQLGVEPPMFQETMV
EELQPRNERYSGRRNEESFRPGDAGYPDLGIPPDGNIPMIHAHAPIYGGSDYEPYAVGRS
ASQGRGNGVRGSFGSSVQHFDGPTCVKLLNLPFQIRSEEIYDFCYGYRIIPGSVSVQYDQ
SGKSKGSATAVFESHREALTAVEELSGRPIGQRKIQLVLA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgtcatccgtttacagggactaagagtctctgcaggttccgaggatattcgc
aagttcttcactggcctcaaaattccagatggaggagtgcatatcattggtggggagcaa
gaggaagcttttgttatctttgcttcggatgaggatgcaagaagagccatgatacgatca
ggaggttgcattaagggttcacctgttgcattgctactaagtagtaaatcagagatgcag
aacctacttgaaagaagtacaagagatgtagagctagatcaaaagagacgactcgaggag
aaagcaagacacactcgaagacctttggatccagaggggggcaggagatcagctagcaga
tcagactataaccctccaccccagcaccagagggcttccaacactaatgatgacttgcat
gtgtttctcaaagggatgcccttctctgtgactgaaggagaagtccgtgatttcttctgt
gatctacttattgatgaaatattcttattgaaaaatgcaaatggttcaaaaaatgggaaa
ggtttcgtaaaatttgcagcaagagaggatgcaaacgaagctctgaagagagataggcaa
tacattgggtcaaggtacgtcgaagtttcctcaacaacagaagatgattggcgtcgggct
actggtaaagtgtcaatggctgtcaacaagcatgacaactttgaaagggagagatcccct
attcgccatcaaaggaatccacattatgtgaggtcagagtcccctttggctcagaggcca
gttgctccttccgatgaggagtactgtgttttgattgaaaatctgtcctattcggtggaa
aaagaagacataaaaaagctttttcgcaatgcaaagcttgaggatgaccagatcctacac
ttaattggcagtgatggaaaaagaacaagatctgcatttgtgctgttcaagaatctgcat
gactattgtgatgccttgactaatgaaaaaaggtccctttggaaccgatttattcatacc
cgaccaatctcaagagaaaaaatgatcagccttctgcagtctcagagcatggatggcgga
ccacctggaaactctgcaacgtttcaggacagtcctccatctttccccagcgatccctat
gactcagagaaaatgtgtctttttgtgcggaacctaccatttgatgtacggaaagttgag
atcatggactttttccttgggtttaatatcacagaggacatggcgtttgtgctgcgtgac
catactggtgcaggagttgggaaggctttggttctctttcggtccgaggcagaggctatg
aatgcactctctctcaatggacaaaggtttcttgggtcagaagtcatcctgaaatgcatt
tcacgctctcagatgcgtcagttgggtgttgagccaccaatgtttcaagagacaatggtg
gaagagctacagccaagaaacgagcgatattcaggcaggagaaacgaggaatcctttcga
cctggtgacgcaggctaccctgacttaggaattcctcctgatggtaacataccaatgatt
catgcacatgctcccatctatgggggcagtgattatgagccctatgcagtaggccgttct
gcttcacaaggcagaggtaatggtgtacgtggtagctttggttcctctgtgcagcatttt
gatggccccacctgtgttaagcttcttaacttgccatttcaaatacgaagtgaagaaatc
tatgacttttgctacggatatcggattatccctggatctgtttcagtgcagtatgaccag
agtgggaaatctaaaggctcagcgactgcagtgtttgagtcccatagggaagcattaaca
gcagttgaggaactgagtggaagaccaataggtcaaagaaaaatacagctagtactagct
tga
DBGET
integrated database retrieval system