Trematomus bernacchii (emerald rockcod): 117480626
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Entry
117480626 CDS
T09643
Name
(RefSeq) terminal nucleotidyltransferase 4A-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117480626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117480626
03016 Transfer RNA biogenesis [BR:
tben03016
]
117480626
Enzymes [BR:
tben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
117480626
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
117480626
Transfer RNA biogenesis [BR:
tben03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
117480626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
Motif
Other DBs
NCBI-GeneID:
117480626
NCBI-ProteinID:
XP_033983896
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MDPRTAWMQPEQKGPANSPWVHIWESSQGFGANSGIDNHLHHQRNFASLNANSTEANGEY
RKNVALPGCVFGKLSKRDSGGVERGNVRRTGSLSPSSSSLDSEAESSSPSGSSLQIDNLN
EEASRFLHYGEHELNENNLRRQQQPPPPFHTVQQHCRSMQQSGGHTPTGMKNQHGNKHHH
YQSQSSGRRRHLNRANTFHGINPLLSYACNGHHVDSSLCLWKTRRYSPGINGLHEEIVDF
FNFMSPRPEEEAMRRDVVNRIEGVIMDLWPTARVEIFGSFSTGLYLPTSDIDLVVFGQWD
HPPLQELEQALKKHNVAGPYPIKVLDKATVPIIKLTDHETEIKVDISFNVETAVKAAQFI
KSYLKKYTILPPLIFVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDTRRANI
NLGILLIEFFELYGHNFNYIKTGIRVKNDGAYVSKEEMLKAMGSGNRPSMLCIEDPIQPG
NDVGRSSYGVLQVKQVFDFAYMVLSHGVSPLARAYPNKEYDSTLGRILKVSPEVLAYRDW
TIKKWAAKQHVKLENNDIETCEQDLARLMLVTVEDQRDSSSPLSTDSPSPSPVFLPSPHH
HSSSSSACSLSSSSGSDIESDSPPNSNTAIQLQSLTLASVHSVLQMASDLGVTHPPGFIQ
TVPQVQMSFPENLTIPSLSNCQFYHENPPSVNVVHHHMTHAAQVSQHTNSTSPLHQLHHP
QMVGHQSHTVLHHGSLDPQKVGFKQNQGGVLQGQNQTQGNFSPQQRFVPQGHKTAPGFRN
QQQYNRNTWRSKKKENLPALNQSR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggatccccggaccgcttggatgcagccggaacagaagggacctgccaattccccgtgg
gtgcacatttgggaatcctctcagggatttggagctaactccggcatcgacaaccacctt
caccaccaacgcaactttgcatcattaaatgcaaactccacggaggctaacggtgagtat
cgcaagaatgtagcactgccggggtgtgtgtttgggaaactgtcgaagcgagacagcggc
ggcgtagagaggggaaatgtccggaggacgggctcgttgtcgccgtcctcctcctcactg
gactcggaggccgaaagctcctcgccttccggctcctcgctgcaaatcgataatttgaac
gaagaggccagtcggtttttacactacggcgagcacgagttgaacgagaacaatctcaga
cggcaacagcagccccctccgccttttcacactgtccagcaacactgtcgcagcatgcaa
caatctggcggccacacccccaccgggatgaaaaatcagcatgggaacaagcaccaccac
tatcagtcacagtcatccggccgcaggaggcacctgaacagggccaacactttccacggt
atcaacccgctcctgtcctacgcctgcaatggacaccatgtagactcttcgttatgcctg
tggaaaaccaggcgctacagcccgggtataaacggtcttcatgaagaaattgtggacttt
ttcaacttcatgtcgccacgaccagaggaggaagccatgagaagagatgttgtgaacaga
atagaaggtgtcatcatggacttgtggcccacagcacgggtggagatatttggcagcttc
agcacaggactttatcttccaacaagtgacattgacctggtggtgtttggacagtgggac
catcctccactgcaggaactggaacaagctctgaagaagcacaatgtggctggcccttat
cccatcaaggtcctcgacaaagctacagtgccaatcatcaagcttactgaccatgaaacg
gagataaaagtggacatcagcttcaatgtagagactgcagttaaagcagcacagttcatc
aaaagctatcttaagaagtacaccattctgccgcctctgatctttgtcctgaagcagttc
ctacttcagagggatctgaatgaagtcttcactggaggcatcagctcttacagccttata
ctaatggccatcagcttcctgcagttacaccctcgaatcgacacgcgacgtgccaacatc
aacctgggcatcctgctgatcgagttcttcgagctgtatggccataacttcaactacata
aagaccggcatcagggtgaagaatgatggagcttacgtgtccaaggaggaaatgctcaaa
gccatggggagtggaaacaggccatccatgctctgcatagaagacccaatacagccaggg
aacgacgtgggcaggagttcatacggtgtcctgcaagtcaagcaggtgtttgactttgcc
tacatggtgctgagtcatggagtatctcctcttgcacgcgcttaccccaacaaggaatac
gacagcactttaggacgcatcctcaaagtcagcccagaggtgttggcctacagggactgg
acaataaagaagtgggcagccaagcagcatgtcaagttggagaacaatgatatagagacc
tgtgagcaggaccttgccaggctgatgctggtcactgtagaggatcaaagagactcttcc
tcccccctcagcactgactctccctcaccttcgccagtgttcctccccagccctcaccac
cactcctcatcgtcctcagcatgctcgctctcctcatcctccggaagtgacatagagtct
gattctcccccaaacagtaatactgcaatccaactccagtctctcaccctggcctcagtc
cattcagttctccagatggcttctgatttgggggtaacgcatccaccaggctttatccag
acagtgcctcaggtccagatgtccttcccagaaaaccttaccatcccctcactctccaat
tgccaattctaccacgagaatccaccttcggtcaatgttgtgcaccatcacatgacacac
gctgcacaagtctcccagcacacaaactccacaagccccctccaccagctccaccacccg
cagatggtaggacatcagagccacacagtgctacaccatggctcccttgatccgcaaaaa
gttggcttcaagcaaaaccaaggtggagttctccaaggtcaaaatcaaactcaaggtaac
ttcagtccccagcagcgctttgtcccccagggtcataagacagcaccaggtttcaggaac
cagcagcagtacaaccgtaacacctggcggagcaaaaagaaggaaaaccttcctgctctt
aaccagagcagatga
DBGET
integrated database retrieval system
