Trematomus bernacchii (emerald rockcod): 117480725
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Entry
117480725 CDS
T09643
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117480725 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117480725 (snx27b)
Membrane trafficking [BR:
tben04131
]
Protein recycling
Others
Others
117480725 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117480725 (snx27b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
VirE3
PDZ_2
SNX17-31_F2_FERM
SNX17_FERM_C
USP7_C2
DUF5394
Motif
Other DBs
NCBI-GeneID:
117480725
NCBI-ProteinID:
XP_033984050
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MADVEGEGICSSVPPLPHPSSRNGSGSGNVTPGSCQATTVTSGPRLVQIVKSDSGYGFNV
RGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHKQV
VDLIRAGERELVLAVLSVPPQEAECLDPGDDVSALSCYDYSDKQAVPISVPSYKHTELNQ
EKFVVYNVYMAGRQLCSKRYREFVILHQNLKREFANFTFPKLPGKWPFSLSEQQLDARRR
GLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTLTARVRKNSTT
DQVYQAVVMKLGMDSVTASYFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAIPGTCLTL
RKWLFTTEEEILLNDNQLAVNYFFHQAADDVKKGFVKAEQKSHQLQKLAEQKKMSMYLSL
LRGCEGYNEILFPHCSCDSRRKGHVITAISIHHFKLHACTEEGTLENQVIAFDWGEMQRW
DTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATDKDNK
NCSKDEYFPAAEAQKGWRHLGREIVTS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgagggagagggaatttgttcgtcggtccctccgttacctcacccttct
tcgcgtaacggctccggtagcggtaacgttacaccgggcagctgccaggcaaccaccgtt
acatcaggcccacggctggtgcagatagtgaagtctgactcgggatatggctttaatgtt
cggggacaagtcagtgaaggtgggcaactacggagcattaacggagaactgtatgctccc
ctgcaacatgtcagtgctgtcctaccgggaggagccgccgacagagccggtatttccaag
ggcgacaggattctcgaagtaaatggtgtaaatgtagagggagcgacccacaagcaggtg
gtggacctgatccgggccggagagagggagctggtgctggccgtgctgtccgtcccgccc
caggaggccgagtgcctcgatcccggagacgacgtttcagccctgtcctgctatgactac
tccgacaagcaggctgtccccatctctgtcccgagctacaaacacacagagctcaaccag
gaaaagtttgtggtatataatgtatacatggcaggccggcagctatgctctaagcgttac
cgtgagtttgtgatcttacaccaaaatctgaagagggaatttgccaactttaccttccca
aaactgcctgggaaatggcctttttcactgtcggagcagcagctggacgcgcgacgcagg
ggtcttgaggaatacctagagaaagtgtgctctgtacgggtaattggcgagagtgacatc
atgcaggagttcctgtctgaatcagatgagaactataatggcgtgtcagatgtggagtta
agaatagccatgcccgacaaaactacgctaaccgccagagttcgtaaaaactccactaca
gaccaggtgtaccaggctgtggttatgaaactagggatggacagtgtaacagccagctac
ttcgctctgtttgaggtcatcaaccacaccttcgtgcgaaagcttgcccccaacgagttc
cctcacaagctctacgtacagaactatacctcagccatcccaggaacctgcctcaccctg
agaaagtggctcttcactactgaagaggagattctgctcaatgacaaccagcttgctgtc
aactacttctttcaccaggctgctgatgatgtgaagaaaggtttcgtcaaagcagagcag
aagtcccaccagctgcagaagctggcggagcagaagaagatgtctatgtatctgagtttg
ttaaggggttgcgagggctacaatgagatcctattcccacactgttcctgcgactcgcga
cgcaaaggccatgtcatcacagccatcagcattcaccacttcaagctgcacgcctgcacc
gaggaagggacactcgagaaccaggtgattgcatttgactggggtgagatgcagcggtgg
gacacagatgaagagggcatggccttctgctttgaatatgcacgaggagagaagaaacca
cgatgggtcaagatatttacaccctattttaactacatgcatgagtgcttcgagagagtc
ttctgtgagctgaagtggaggaaggaggtggaagaggaggctacagacaaggacaataag
aactgcagtaaagatgaatattttccagctgctgaggcacagaagggatggaggcaccta
ggaagggagattgttacctcttaa
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integrated database retrieval system
