Trematomus bernacchii (emerald rockcod): 117480753
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Entry
117480753 CDS
T09643
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117480753 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117480753 (rorc)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117480753 (rorc)
Nuclear receptors [BR:
tben03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117480753 (rorc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117480753
NCBI-ProteinID:
XP_033984099
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All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MEYEELDVPPTDNPIKREGAVSKKTHLTQIEIIPCKICGDKSSGVHYGVITCEGCKGFFR
RSQLPTVSYSCSRQNNCQIDRASRNRCQHCRLQKCLAQGMSRDAVKFGRMSKRQRDSLIA
EVERHRQQQQQQLQEDAPSLLSFPTKARPDRSAQLLQPMASAYSFSGDSELLSYTADVHP
YLMCSPNESQVSGMIYRGSAVSPTLRSQGRGDNSGHPEIRGFDSRQPPHDLVAIHPYSPL
EDPYSLYPHSLRNVDELCASIVRSHRETTQYRVEELQALRWKVLSREEIQVYQSKSVDEM
WQHCAIRLTDAVQYVVEFAKHIPGFRMLSQNDQIALLKTGSMEVVLVRMCRYFNTENNTV
FFDGKFAGVEVFKSLACGDLIAAVFDFAHDMCALKLTEQQIALFSALVLINTERPCLEDR
SRVQRVQRSVEFGLTHILHRDNQESLMHKLYQRMAVLRSLCSLHMEKLRWFSQRYPLTAH
SLFPPLYKELFACEAELLPGTTH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgaggagctcgacgtgccccccactgacaaccccatcaaaagagaaggagcc
gtgtccaagaagactcatttgacccagattgaaattattccatgtaagatctgtggggat
aagtcctctggagtccattatggagtcatcacttgtgagggctgcaaggggttcttccgg
cgcagccagttgcccactgtctcctactcctgctccaggcagaacaactgtcagatcgac
cgggccagccgcaaccgctgccaacactgccgcctgcagaagtgcttagcacagggcatg
agcagagatgctgtgaaattcgggcggatgtccaaacgtcagcgggactctctgatagct
gaagtggagcggcaccggcagcagcagcagcagcagctccaggaagacgccccgtctctc
ttgtccttccccaccaaggcccgtccagaccgctcagcgcagctccttcagcccatggcc
tccgcctactccttcagcggggattccgagctgctgtcttacaccgctgatgtccaccct
tacctgatgtgctcccccaacgagtcccaggtgtctggtatgatctaccgaggctccgct
gtgtcccccaccttgagatcccaggggaggggagacaacagcggacaccctgagataaga
ggatttgactccagacagccgcctcatgatctggtggcgattcacccctacagtcctctg
gaggatccttacagcctctatcctcactctctgagaaacgtcgatgagctgtgtgccagc
attgtgcgctcccacagagagaccactcagtacagggtggaggagctgcaggctctcaga
tggaaagtgctcagcagagaggagatccaagtctaccagagcaaatcggtggatgagatg
tggcagcactgtgccatccgactgactgatgccgtgcagtacgtggtggagtttgcgaaa
cacatcccaggttttcgtatgctcagccagaacgaccagattgctctcctgaagaccggc
tccatggaggtggttctagtccggatgtgtcgctacttcaacacagagaacaacaccgtc
tttttcgatgggaaattcgctggagttgaagtcttcaagtctctggcatgtggtgattta
atcgcagcagtgtttgacttcgctcatgatatgtgtgctctaaagctcactgagcagcag
atcgctctcttcagtgctctggtgctgatcaacacagagcgtccatgtctggaggacaga
agcagagttcagcgagtgcaaagaagcgtggagtttggactcacacacattcttcaccga
gacaaccaagaaagtctaatgcacaagctgtaccagaggatggcagtgctgcgttcactg
tgcagtctgcacatggagaagctgcgctggttcagtcagcgttacccactcaccgcgcac
tctctgttccctcctctctacaaggagctgttcgcctgtgaggccgagctgctgccggga
accactcactga
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