Trematomus bernacchii (emerald rockcod): 117480787
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Entry
117480787 CDS
T09643
Name
(RefSeq) uncharacterized protein LOC117480787 isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117480787
03036 Chromosome and associated proteins [BR:
tben03036
]
117480787
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117480787
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117480787
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117480787
UBL E3 ligases
117480787
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117480787
Cilium and associated proteins [BR:
tben03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117480787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
MecA
zf-ANAPC11
PWI
Motif
Other DBs
NCBI-GeneID:
117480787
NCBI-ProteinID:
XP_033984136
LinkDB
All DBs
Position
Unknown
AA seq
1600 aa
AA seq
DB search
MAPTRMKLRVRLRDNNTAASTTGSAEPVEEEERSRGVRSSSRRKKKPTTNTPNTPTPSSS
SPPPPPPPLPLASSSSSLPVPEEASPDSKCPICLDRFNNLAYLDRCLHRFCFPCIQEWSH
NKAECPLCKQPFASILHSVLAEDDFKEYTLRPPTPASSSVAATVAMVAAMASAARNDHQM
RLMLRRQRREEEEGGGGGGGGEAVRRRRRRRDRERGGRGGRGGVWEWYINSRPVRMEEDE
EEEEEQQRDVDEALDRGVIFEGLSGLVPPGDPPVDPGDRASRRLTSRLVSRRRLQRVGGA
VRRLRDRETVAFRRSLYRLGVRVHGVAGVSAELLPRDITADSFRLSPAPLERLRPWLRRE
LTVLYGVHTSLVDIVQRIVTARLQRHGLEDQNTIEEELRPFLLARTNHFLHEMVSFASSP
LALESYDLEAVYEPPDDAIVQLNDDSSDGSVIAISEEEEDEEMDEEEAGNDELPTGSCLS
LAAWDDETPGPSYSLSPANQEAAGKDEEGEEEEECLIVGYKKPIAERTPELVQLTSDSEE
EEEKTKKEEEEEKEEEEEEEKKKEDEEEELPAVAPPLPQSPTIPPPAPGCNKDGGSWSSP
ERDRKEKKKTKRRKRKTSGTLFNPNRSIFPAMMRRRSSSAESSPPDSNWDGSSSSSSSSS
SSSSPMENHGEKPGGKRKYKSRHLDHDEKDPTWRPREDKERRRRSREDEERKESRRREDR
SPSVEIIYEGTIPPNAAHPPARKRRRKRQRKTQHSSSPVIITLDSDSSHEANNNNNSSCS
SSPISSQQTVDFSDLPPLPLVHSSGVGGALSGEIGDLPVDILDPIAINSDIDVENFEVGG
SSLDEEPIRTSDLSDDAEVTNSSLKRKSISDSRLLARILNDLQGINTAKLNPLNFEPRDS
RRNRFLRDDDIDHRDFDPPTYRNATHPLTYFERLKEKEVPPLLKQASPVRTYNRNTPPPL
KHKDAGSPHLSPISPIDLHSNPTIDVSQGNRAIPPISTLKKHFTSALALRGELASTSSAI
DSHSSKVSVHSTSQKPPIDSHSSSSSETGSTSAACLSHLDFNLIPPAKETSSSTVDLHPV
NSSSPFECHTAKTGWSNEKLANADSRNKTLRPDYCHVSPIDLHPSSRGGEDFSGVFCNDK
SPPVFVSSIAAFPPIDSHSSSKRDNFRGRYAPSTAPSNRLSPIDMHPNSPKHTVDLHSSS
KRYHFLESLSTSRASSEVKTAPRSSYSPIDLHPKSPKHTPDLHSLSRRDNFLESLSTSRA
SSEVKTAPRSSYSPIDLHPKSPKHTPDLHSLSRRDNFLESLSTSRASSEVKTAPRSSYSP
IDLHPISPKHTADLHSLSWRDNFLESLSTSRANSEVKTAPRRSYSPIDLHPISPKSTVDL
QTSSKKDNFPVSLSTSRDSSMPTTAPRLSPIDGHLKIPKYTADFHSSSKRDKLSERLSRS
VLTPATSGRWSPIDLHPKSPESTGDFHSFSTTSKGLTNNKASLLVNHGDALPHGRLTPVD
LHHTSPFSPINTHPSSSHFNHTALTAATFQTSRQKCSSQSEATIDSHSKPQNHHNRFPTD
ALSQNSLPIDSHLKNSRADNHVENQWNSNSPIDAHSDSAT
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccaggatgaagctgcgcgttcgtcttcgggacaacaacacggcggcttca
acgacaggaagtgctgaacctgtggaggaagaggagcgaagccgaggcgttcgcagcagc
agcaggaggaagaagaaacccaccaccaatactcccaatactcccactccctcttcttcc
tcacctcctccacctcctcctcctcttcctctcgcctcctcttcctcgtctcttccagtg
ccagaggaggcgtctccagactcaaagtgtcccatctgcctggaccgttttaacaacttg
gcgtatttggaccgctgtctccatcggttctgcttcccctgcatccaggagtggtctcac
aacaaggccgagtgtccgctctgcaagcagcccttcgcctccatcctgcactccgtcctc
gctgaagacgactttaaggaatatactcttcgtcctccgacgcccgccagcagcagcgtg
gccgccaccgtcgccatggtggcggccatggcgtctgcagcgaggaacgaccaccagatg
aggctgatgttgaggaggcagaggagagaggaagaggagggaggaggaggaggaggaggg
ggggaggcagtgaggaggaggaggaggaggagggatagagagaggggaggaagaggagga
agaggaggggtttgggagtggtacatcaactctagacctgtcaggatggaggaggacgag
gaggaagaggaggagcaacaacgggacgttgacgaggcgttggatcgaggcgttatcttc
gagggtctgtcgggcctcgtaccccccggcgacccccccgttgaccccggcgaccgtgcg
tctcgccgcctgacgtcccgcctggtgtctcgccgccgcctgcagcgcgtcgggggggcg
gtgcggcgcctcagggatcgagagaccgtggcgtttcggcgctcgctctatcgtctcggc
gtgcgagtgcacggggtcgccggcgtctccgctgagctgctgccgcgtgacatcacagcc
gacagctttcgcctaagccccgcccccttggaaaggctccgcccctggctgcgccgcgag
ctaacggtgctttacggtgttcacacgtccttagtggatatcgtgcagagaatcgttaca
gcgaggcttcaacgacacggcctggaggaccagaacaccatagaagaagagttacgcccc
ttcctgttggcgcgaacaaaccacttcctgcacgaaatggttagcttcgcaagctcgccg
ttagcgttggaaagctacgatcttgaggcagtttacgagccgccggacgatgctatcgtg
cagctaaacgatgacagtagtgacgggtccgttatcgctatttcagaagaagaggaagac
gaggaaatggacgaagaagaggcgggaaacgatgaactcccgacaggaagttgcctcagt
ttggcggcgtgggacgacgagacgccaggcccctcctactctctgagcccggccaatcag
gaggcggcagggaaggatgaagagggagaagaggaagaggagtgtttgatcgttgggtac
aagaagccgatcgcagagcggacgccggagctggtgcagctgacgtcagatagtgaggaa
gaggaggagaagacgaagaaggaggaagaggaggagaaggaggaggaggaggaggaagag
aagaagaaggaagatgaagaggaggaacttcctgccgtcgctcctcctcttcctcaatct
cccacaatccctcctcccgctcctggctgtaacaaagatggcggctcgtggtcgtccccc
gagagagacaggaaagagaagaagaagacgaagaggaggaagaggaagacgagcggcact
ttgttcaacccgaatcgttctatctttcccgccatgatgcgccgccgctcctccagcgcc
gagtccagcccgccggattctaactgggacggctcttcgtcatcttcatcatcctcctct
tcctcttcctcccccatggaaaaccacggggagaaaccgggagggaagaggaaatataaa
agccgccatctggaccacgatgagaaggaccccacatggcggccgcgggaggacaaggag
cgccggaggaggagccgggaggacgaggagaggaaggagagcaggagacgagaggatcgc
agtcccagcgttgagatcatctacgagggaaccatcccccccaacgcagcacaccccccc
gctaggaaacgccgcaggaaacgccaacgcaagacccagcacagcagttctccggtcatc
atcacgctggatagcgacagcagccacgaggctaacaacaacaacaacagcagctgcagc
agcagtccaatcagtagccagcagaccgttgacttctcagaccttcctcccctcccattg
gtccattcctccggagtgggcggggctttgagcggtgaaatcggcgatcttcccgtcgac
atcctggatccaatcgccatcaacagtgacatcgatgtggaaaactttgaagtgggcggg
tcctcattggacgaggagccaatcagaacatccgatttatccgatgacgcggaggtcaca
aattcatcacttaaaagaaagtcgatttctgacagccgcttgttagcgaggatcctcaac
gacctgcagggaatcaatacggctaaattgaatccgttgaactttgagccacgtgattcc
agaagaaatcgctttttaagggacgacgatatcgatcatcgggacttcgacccgccgacg
tatcgtaacgccacccacccgttgacttattttgagcggttaaaagaaaaggaagtcccg
cctctcttaaaacaggcgagtcccgttcggacgtacaacagaaacacgccgccgccgtta
aaacacaaagacgccgggagtccacacctgtcgccgatttctcccattgacctccattca
aatcccaccattgacgtgtctcaaggtaatcgcgccatcccgcccatctcaacgctgaaa
aaacatttcacgagcgctctggctctgagaggagagctggcctccactagttcagccatt
gactcccattcttctaaagtcagcgtccattccacgagtcaaaaacctcccattgattcc
cattcttcttcttcttctgaaactggctccacaagtgctgcttgcttatcacatctggat
ttcaacttgatcccgcccgcaaaggaaacctcatcttcaaccgttgacttgcatcctgtg
aattcttcatctccctttgaatgccacacggccaagactggatggtccaatgagaagcta
gctaacgccgactctaggaataagactctgagaccagattactgtcatgtttcacccatt
gacctccatccttccagccggggtggagaagatttctcaggagttttctgtaacgacaaa
tcaccgcctgtgtttgtttcatccatcgctgcattcccaccaattgactcccactcttcc
agtaagagagataactttagaggtagatatgcgccatcaacagctccaagcaacaggttg
tcacccattgacatgcatcctaacagtccaaaacataccgttgacctccactcttcaagt
aagagatatcactttttagaaagtctttcaacctctagagctagctcggaggtaaaaacg
gctcccagaagcagctattcacccattgacttgcatcctaaaagtccaaaacatacccct
gacctccactctttaagtaggagagataactttttggaaagtctttcaacctctagagct
agctcggaggtaaaaacggctcccagaagcagctattcacccattgacttgcatcctaaa
agtccaaaacatacccctgacctccactctttaagtaggagagataactttttggaaagt
ctttcaacctctagagctagctcggaggtaaaaacggctcccagaagcagctattcgccc
attgacttgcatcctataagtccgaaacataccgctgacctccactctttaagttggaga
gataactttttggaaagtctttcaacctctagagctaactcggaggtaaaaacggctccc
agaagaagctattcacccattgacttgcatcctataagtcccaaatctaccgttgaccta
caaacatccagtaagaaagataactttccagtaagtctttcaacttctagagatagctca
atgccaaccacagctcccaggttatcacccattgacgggcatcttaaaattcccaaatat
accgctgacttccactcttccagtaagagagataaattgtcagaaaggctttcaagatca
gtgttaacaccggctacaagtggcaggtggtcacccattgacttgcatcctaaaagtcca
gaatctaccggtgacttccactctttcagcacaacttctaaaggactgacgaacaacaaa
gcatcgttgttagtcaatcatggggatgcattgcctcatgggcgcctgacacccgttgac
ttgcatcatacgagtcccttttcccccattaacacacatccttcaagctcacactttaac
cacactgccttaaccgccgctaccttccagacatcacgtcaaaagtgcagttctcagtcc
gaggctaccattgactcccactcaaagcctcaaaaccaccacaataggttccccactgac
gctctttcgcagaatagtctccccattgactctcatctaaaaaactctagggcggacaat
cacgtggagaaccagtggaactcaaactcacccattgacgcccattcagactcggccacg
tag
DBGET
integrated database retrieval system
