Trematomus bernacchii (emerald rockcod): 117480796
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Entry
117480796 CDS
T09643
Symbol
cnga1b
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117480796 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117480796 (cnga1b)
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117480796 (cnga1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
EMC3_TMCO1
DUF3043
NPR3
Sec62
DUF2207_C
Tim54
Presenilin
PFF1_TM
CDC45
GmrSD_N
Motif
Other DBs
NCBI-GeneID:
117480796
NCBI-ProteinID:
XP_033984150
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MAKVAPSVRSLNRSTSPTIALQDDPGEDMERDRTDQQAGPGKLFNANNSNNNEEEEKDKT
KKKREKKERKEKKEKEKQEKKERKEKRLKEKEEKEKEKKEKEEKEKEKKAKDEAPKEVTV
IDPASNLYYHWLGLITIPVMYNWTLIIARACLEELQSDYLYFWFFVDFLCDLLYIADMLF
RTRTGYLEQGLLVKDVQKLRERYLVSLQFKLDMVSMIPTDLLYFIFGLRYPEIRLNKLLR
FNRMLEFFQRTETRTNYPNALRISNLVMYIVIIIHWNACLYYSFSKAIGFGADRFVYPDP
ANPEFGRLIRKYAYSMYWSTLTLTTIGETPPPVENSEYFFVVTDFLVGVLIFATIVGNVG
SMITNMNAARANFQARIDAIKQYMTFRKVTKDLEKRVIKWFDFLWTNKKAVDEREVLKYL
PDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMY
IIKEGKLAVVADDGIKQFVVLSDGSYFGEISILAIKGSKAGNRRTANIRSIGYSDLFCLS
KDDLMEALTEYPDAKALLEEKGRQILMKDGLLDLEVAAQGPDPKEMEEKVERMTTSLDVL
QTRYARLLAEHEATQSKLKHRVHRLESKLVTTERTTEEEGAGTA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtagctccgtcagtccggtctctaaacaggtcgacatcacccaccatcgct
ctccaggacgatccaggtgaagacatggagagggacagaaccgatcaacaagccggacca
ggaaagctgtttaacgccaacaacagcaacaacaacgaagaagaagagaaggacaagacg
aagaagaagagagagaagaaggagaggaaggagaagaaggagaaggagaagcaggagaaa
aaggaaaggaaggagaaaagactgaaggagaaagaggaaaaggagaaagagaagaaggag
aaagaggaaaaggagaaagagaagaaggccaaagacgaggctcctaaagaggtcacagtc
attgacccggcgagtaacctctactaccactggctgggtcttatcaccatccccgtcatg
tacaactggaccttgatcatagccagggcgtgcttagaggagctacagtctgattatttg
tatttttggttcttcgtggattttctatgcgacctcctgtacatcgctgacatgctattc
agaacaaggaccggttacctggagcagggtctgctggtgaaggacgttcagaagttgcgt
gagcgctacttggttagcttacagttcaaactggacatggtctccatgatccccacagac
ctcctgtacttcatctttggactgagataccctgagatacgcctcaacaagctgttacga
ttcaacaggatgctagagttcttccagaggacggagacgaggactaactacccgaacgct
ctccgaatctccaacctcgtcatgtacatcgtcatcatcatccactggaacgcctgcctc
tactactccttctccaaggctatcggtttcggggccgacagatttgtgtatcccgacccg
gcaaatccagagtttggtcgcctgataaggaagtacgcatacagtatgtactggtccaca
ctgacgctcaccaccataggagagacgccgccccctgtggagaactcagagtactttttc
gtcgtcactgacttcctggtgggtgtgttgatctttgccaccatcgtcggtaacgttggt
tcgatgatcaccaacatgaacgctgccagagccaacttccaggctcgcatcgacgcaatc
aaacagtacatgaccttcagaaaggtaactaaggacctggagaagcgagtgatcaaatgg
tttgatttcctgtggaccaataagaaagcagtggatgagagggaggtgttgaagtacctg
ccagacaaactgagagctgaaatcgccatcaacgtccacctggacaccctgaagaaggtt
cgtatctttgcggactgcgaggcaggtctgctggtggagctggtgctgaagctgcagcct
caggtctacagtcccggagattacatctgtaagaagggcgacatcgggagggagatgtac
atcatcaaggaggggaagctggctgtggtcgctgacgacggcatcaagcagtttgtggtt
ctgagcgatgggagctacttcggagagatcagcatcctggctattaaaggcagtaaggca
ggaaatcgtaggacggcgaacatccggagcatcgggtactcggacctcttctgcctctcc
aaagacgacctgatggaggcgctaacagagtaccccgacgcgaaagctctactggaggag
aagggacggcagatcctgatgaaggacgggctgctggacctggaggtggcggcacagggt
ccggaccccaaggagatggaggagaaggtggagaggatgacgacctcgctggacgtcctg
cagactcgatacgctcgactgttggccgagcacgaagccacgcagagcaaactgaagcac
cgagtccaccgcctggagagcaagctggtgacaacagagagaaccacagaagaagaagga
gctggaaccgcctaa
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