KEGG   Trematomus bernacchii (emerald rockcod): 117480797
Entry
117480797         CDS       T09643                                 
Name
(RefSeq) slit homolog 1 protein-like
  KO
K06261  platelet glycoprotein Ib alpha chain
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117480797
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:tben04090]
    117480797
CD molecules [BR:tben04090]
 Proteins
  117480797
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_9 LRR_5 LRR_LRWD1 LRR_EndoS
Other DBs
NCBI-GeneID: 117480797
NCBI-ProteinID: XP_033984153
LinkDB
Position
Unknown
AA seq 610 aa
MHIFLLFVLLVAPVTAVPGCHGGRDKAHRRQENCTAAGFTEVPTGLEPATKVLMFPQNLF
SSLSWSSFQIFTEIYEIDLTGNKVPELTPSSAPILPSLRVLRLGSNRLTSLPDGSFSACP
ALTELYLEGNALVSLSDNTFSGLSKLEILDLSSNRIQVLPQLMLQPLAVIETLYIQNNKV
LTMPDGWFSPKEDVPYLFLSANPWACSCSLGYLRRYIDEYDYNVYVRNGPILKTDPWSVV
CDSPLRHKATAVLNLEESELCPPEPEHPIRGDGNKPMETVAPTVPVLTNTHIHTTTTAVS
MTTAFALLVAPVKAVPGCHGGRDKDHRRQENCTVAGFTGVPTGLEPATKVLLFPQNLFSR
LSWSSFQIFTEIYEIDLTGNKVPELTPSSAPILPSLSVLRLGSNRLTSLPDGSFSACPAL
TELYLEGNALVSLSDNTFSGLSKLEILDLSSNRIQVLPQLMLQPLAVIETLYIENNKVLT
MPDGWFSPKEDVPYLFLSANPWACSCSLGYLRRYLDEYEFNVYVRNGPIVTTDASSVVCD
SPLRHKATAVLNLEESELCPPEPEHPIRGDGNKPMETVFKATTTTPKATTTTPKATTTTT
KGNNHHPRGA
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgcacatcttcctcctcttcgtcctcctcgttgctccggtaacagcggttcccggttgt
cacggcggcagagataaggcccaccggagacaggaaaactgcaccgcggcgggattcacc
gaagtaccgacgggactcgaacccgcgaccaaggttttgatgtttccccagaacctattc
tccagcctctcctggtcctccttccagatcttcacggagatctacgagatcgacctcact
ggaaacaaggttccagagttgacccccagctccgctccgatcctccccagcctcagagtc
ctccggctggggtcgaaccgcctgacctccctccctgatggatccttctccgcctgtccg
gcgctgactgaactctacctggagggcaacgccctggtttctctgagtgacaacaccttc
tccggactcagcaagctggagatcctggacttatcgtccaatcgtatccaggttcttcct
cagctcatgctacaacccctcgctgtgatcgagaccctgtacatccagaacaacaaggtc
ctgacgatgcctgacggttggttcagtccaaaggaggacgtgccgtaccttttcctctcg
gccaatccctgggcctgctcctgttccctcggttacctgcgcagatacattgatgaatat
gattacaatgtgtacgtacggaatggaccgatcctcaagaccgacccttggagcgtggtg
tgcgactctcctctgaggcataaggcaacagctgtattgaatcttgaagaatctgagcta
tgtccaccagagccagagcatccgatacgtggagacggaaacaagccaatggaaactgtg
gctcccaccgtcccagttcttactaatactcacattcataccactactactgctgtttct
atgactactgcttttgccctcctcgttgctccggtaaaagcggttcccggttgtcacggc
ggcagagataaggaccaccggagacaggaaaactgcaccgtggcgggattcaccggagta
ccgacgggactcgaacccgcgaccaaggttctgttgtttccccagaacctattctccaga
ctctcctggtcctccttccagatcttcacggagatctacgagatcgacctcactggaaac
aaggttccagagttgacccccagctccgctccgatcctccccagcctcagtgtcctccgg
ctggggtcgaaccgcctgacctccctccctgatggatccttctccgcctgtccggcgctg
actgaactctacctggagggcaacgccctggtttctctgagtgacaacaccttctccgga
ctcagcaagctggagatcctggacttatcgtccaatcgtatccaggttcttcctcagctc
atgctacaacccctcgctgtgattgagaccctgtacatcgagaacaacaaggtcctgacg
atgcctgacggttggttcagcccgaaggaggacgtgccgtaccttttcctctcggccaat
ccctgggcctgctcctgttccctcggttacttgcgcagataccttgatgaatatgaattc
aacgtgtacgtgcggaatggaccgatcgtcacgaccgacgcttcgagcgtggtgtgcgac
tctcctctgaggcataaggcaacagctgtattgaatcttgaagaatctgagctgtgtcca
ccagagccagagcatccgatacgtggagacggaaacaagccaatggaaactgttttcaag
gcaacaaccaccacccccaaggcaacaactaccacccccaaggcaacaaccaccactacc
aagggcaacaaccaccacccccgaggagcctag

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